Muhammad Zaman | Profiles RNS

Muhammad Zaman, PhD

Professor

Boston University College of Engineering

Biomedical Engineering

PhD, University of Chicago
MS, University of Chicago
BS, Arkansas Technical University

Websites

	Boston University Biomedical Engineering Laboratory for Molecular & Cellular Dynamics
	College of Engineering Faculty
	Twitter
	Public Relations - BU Experts

ORCID : 0000-0002-3723-5431

Muhammad Zaman is a Professor in the College of Engineering and the principal investigator of the Laboratory for Molecular & Cellular Dynamics at Boston University and a Faculty Fellow of the Frederick S. Pardee Center for the Study of the Longer-Range Future. He holds a PhD in Chemistry from the University of Chicago and was a Herman and Margaret Sokol Foundation Postdoctoral Fellow in cancer research at MIT. He has been a recipient of the FEBS outstanding Young Investigator Award and was most recently awarded the Regents Teaching Award, the highest teaching award across the entire University of Texas System of Institutions. Professor Zaman joined BU from UT Austin in fall 2009.

Dr. Zaman’s research focuses on understanding the systems biology of tumor invasion and metastasis. The second main thrust of his research focuses on developing computational and experimental tools to improve the quality of life, education, and the practice of medicine in the developing world. He is working closely with institutions of higher learning in curriculum development and implementation. In addition, he partners with various nonprofits around the globe, in particular with the developing countries, to develop cheap, robust, and easy-to-use solutions to develop improved diagnostics in remote areas.

Associate Chair for Undergraduate Studies
Boston University College of Engineering
Biomedical Engineering

Professor
Boston University School of Public Health
Global Health

Member
Boston University
Evans Center for Interdisciplinary Biomedical Research

Graduate Faculty (Primary Mentor of Grad Students)
Boston University Chobanian & Avedisian School of Medicine, Graduate Medical Sciences

BU Research
NIH RePORTER Research

D-ISN/Collaborative Research: Financial and Network Disruptions in Counterfeit and Illegal Medicines Trade
08/01/2022 - 07/31/2026 (PI)
National Science Foundation
CMMI-2146458

Health of Refugees and Forcibly Displaced Communities
06/16/2023 - 07/01/2025 (PI)
Wellcome Trust

US and EU Border Externalization Regimes: Ethics, Identities, and Impacts
01/01/2023 - 06/30/2025 (Multi-PI)
PI: Muhammad Zaman, PhD
The Andrew W. Mellon Foundation

Fellowship in Quality of Medical Products at Boston University
05/08/2018 - 11/30/2024 (PI)
United States Pharmacopeial Convention

Governing the global antimicrobial commons in a sustainable, acceptable, fair and effective (SAFE) manner
10/01/2022 - 09/30/2024 (Subcontract PI)
York University, Toronto SoSci & Hum Res Coun

Evaluation of Feasibility for Grand Challenges Pakistan Partnership II
04/23/2020 - 09/30/2024 (PI)
Bill and Melinda Gates Foundation

Aptamer Development for the PharmaChk Platform
07/20/2020 - 06/20/2024 (PI)
Merck KGaA (Germany)

2021 DCLC - Dr. Muhammad Zaman
04/01/2021 - 03/31/2023 (PI)
Howard Hughes Medical Institute

Measuring AMR footprint in Pakistan
01/01/2021 - 09/30/2022 (PI)
DAI

D-ISN: TRACK 2: Collaborative Research: Financial Network Disruptions in Illicit and Counterfeit Medicines (FIND-M)
09/01/2020 - 08/31/2022 (PI)
National Science Foundation
IIS-2039785

Showing 10 of 39 results. Show All Results

Title

Yr	Title	Project-Sub Proj	Pubs
2017	Modeling bi-directional signaling and cytoskeletal dynamics in 3D cell migrations	5U01CA177799-05	22
2016	Modeling bi-directional signaling and cytoskeletal dynamics in 3D cell migrations	4U01CA177799-04	22
2015	Modeling bi-directional signaling and cytoskeletal dynamics in 3D cell migrations	5U01CA177799-03	22
2014	Modeling bi-directional signaling and cytoskeletal dynamics in 3D cell migrations	5U01CA177799-02	22
2013	Modeling bi-directional signaling and cytoskeletal dynamics in 3D cell migrations	1U01CA177799-01	22
2011	Quantitative Analysis of Tumor Cell Migration in Three Dimensioinal Matrices	5R01CA132633-05	22
2010	Quantitative Analysis of Tumor Cell Migration in Three Dimensioinal Matrices	3R01CA132633-04S1	22
2010	Quantitative Analysis of Tumor Cell Migration in Three Dimensioinal Matrices	5R01CA132633-04	22
2009	Quantitative Analysis of Tumor Cell Migration in Three Dimensioinal Matrices	3R01CA132633-03S1	22
2009	Quantitative Analysis of Tumor Cell Migration in Three Dimensioinal Matrices	7R01CA132633-03	22

Showing 10 of 11 results. Show All Results

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.

iCite Analysis Copy PMIDs To Clipboard

Ching C, Zaman MH, Wirtz VJ. Evaluation of Surveillance Strategies of Antimicrobial Consumption in Animals. Antibiotics (Basel). 2024 May 29; 13(6).View Related Profiles.

Zaman, Muhammad
Wirtz, Veronika

PMID: 38927172; PMCID: PMC11200743; DOI: 10.3390/antibiotics13060505;

Ching C, Zaman MH, Parveen A, Sultan F, Nizamuddin S. Trends in typhoid fever during the COVID-19 pandemic in Pakistan. J Infect Dev Ctries. 2024 Apr 30; 18(4):550-555. PMID: 38728649

Sutradhar I, Kalyan P, Chukwu K, Abia ALK, Mbanga J, Essack S, Hamer DH, Zaman MH. Metal Ions and their Effects on Antimicrobial Resistance Development in Wastewater. bioRxiv. 2023 Jun 17.View Related Profiles.

Hamer, Davidson
Sutradhar, Indorica
Zaman, Muhammad

PMID: 37398478; PMCID: PMC10312816; DOI: 10.1101/2023.06.16.545339;

Ching C, Zaman MH. Infectious disease burden among forcibly displaced populations: considerations for effective research. Pathog Glob Health. 2023 Jul; 117(5):435-436. PMID: 37218440; PMCID: PMC10262769; DOI: 10.1080/20477724.2023.2217401;

Sutradhar I, Ching C, Desai D, Heins Z, Khalil AS, Zaman MH. Effects of antibiotic interaction on antimicrobial resistance development in wastewater. Sci Rep. 2023 May 13; 13(1):7801.View Related Profiles.

Khalil, Ahmad
Sutradhar, Indorica
Zaman, Muhammad

PMID: 37179426; PMCID: PMC10183007; DOI: 10.1038/s41598-023-34935-w;

Higgins G, Higgins F, Peres J, Lang DM, Abdalrahman T, Zaman MH, Prince S, Franz T. Intracellular mechanics and TBX3 expression jointly dictate the spreading mode of melanoma cells in 3D environments. Exp Cell Res. 2023 Jul 15; 428(2):113633. PMID: 37172754

Karrobi K, Tank A, Fuzail MA, Kalidoss M, Tilbury K, Zaman M, Ferruzzi J, Roblyer D. Fluorescence Lifetime Imaging Microscopy (FLIM) reveals spatial-metabolic changes in 3D breast cancer spheroids. Sci Rep. 2023 Mar 03; 13(1):3624.View Related Profiles.

Roblyer, Darren
Zaman, Muhammad

PMID: 36869092; PMCID: PMC9984376; DOI: 10.1038/s41598-023-30403-7;

Suprenant MP, Nyankesha E, Moreno-Garcia R, Buj V, Yakubu A, Shafique F, Zaman MH. Assessing the relationship between operationally defined zero-dose communities and access to selected primary healthcare services for children and pregnant women in emergency settings. PLoS One. 2023; 18(2):e0281764. PMID: 36795706; PMCID: PMC9934415; DOI: 10.1371/journal.pone.0281764;

Sutradhar I, Ching C, Desai D, Heins Z, Khalil AS, Zaman MH. Effects of Antibiotic Interaction on Antimicrobial Resistance Development in Wastewater. bioRxiv. 2023 Feb 10.View Related Profiles.

Khalil, Ahmad
Sutradhar, Indorica
Zaman, Muhammad

PMID: 36798199; PMCID: PMC9934683; DOI: 10.1101/2023.02.10.528009;

Kiwanuka M, Higgins G, Ngcobo S, Nagawa J, Lang DM, Zaman MH, Davies NH, Franz T. Effect of paclitaxel treatment on cellular mechanics and morphology of human oesophageal squamous cell carcinoma in 2D and 3D environments. Integr Biol (Camb). 2022 Oct 15; 14(6):137-49. PMID: 36244059; PMCID: PMC9585394; DOI: 10.1093/intbio/zyac013;

Showing 10 of 133 results. Show More

Ching C, Fuzail MA, Zaman MH, Wirtz VJ. Relative Risk Assessment for Substandard Antibiotics Along the Manufacturing and Supply Chain: A Proof-of-Concept Study. Ther Innov Regul Sci. 2023 Jan; 57(1):121-131.View Related Profiles.

Zaman, Muhammad
Wirtz, Veronika

PMID: 36006562; DOI: 10.1007/s43441-022-00446-5;

Acevedo AJ, Desai D, Zaman MH, Apiou-Sbirlea G. PharmaChk: a decade of research and development towards the first quantitative, field-based medicine quality screening instrument. Analyst. 2022 Aug 22; 147(17):3805-3816. PMID: 35579301

Moed S, Suprenant M, Odjidja EN, Meguid T, Zaman MH. Economic Evaluation of Screening Interventions for Drug-induced Liver Injury. Clin Infect Dis. 2021 12 06; 73(11):e3959-e3965. PMID: 32898262

Sutradhar I, Zaman MH. One Health approaches to improve refugee health. Lancet Glob Health. 2021 12; 9(12):e1646-e1647.View Related Profiles.

Sutradhar, Indorica
Zaman, Muhammad

PMID: 34798016; PMCID: PMC10332798; DOI: 10.1016/S2214-109X(21)00416-2;

Ching C, Zaman MH. Identification of Multiple Low-Level Resistance Determinants and Coselection of Motility Impairment upon Sub-MIC Ceftriaxone Exposure in Escherichia coli. mSphere. 2021 12 22; 6(6):e0077821. PMID: 34787446; PMCID: PMC8597738; DOI: 10.1128/mSphere.00778-21;

Kang W, Ferruzzi J, Spatarelu CP, Han YL, Sharma Y, Koehler SA, Mitchel JA, Khan A, Butler JP, Roblyer D, Zaman MH, Park JA, Guo M, Chen Z, Pegoraro AF, Fredberg JJ. A novel jamming phase diagram links tumor invasion to non-equilibrium phase separation. iScience. 2021 Nov 19; 24(11):103252.View Related Profiles.

Roblyer, Darren
Zaman, Muhammad

PMID: 34755092; PMCID: PMC8564056; DOI: 10.1016/j.isci.2021.103252;

Sutradhar I, Ching C, Desai D, Suprenant M, Briars E, Heins Z, Khalil AS, Zaman MH. Computational Model To Quantify the Growth of Antibiotic-Resistant Bacteria in Wastewater. mSystems. 2021 Jun 29; 6(3):e0036021.View Related Profiles.

Khalil, Ahmad
Sutradhar, Indorica
Zaman, Muhammad

PMID: 34100640; PMCID: PMC8579810; DOI: 10.1128/mSystems.00360-21;

Zaman MH. Inclusion and equity through STEM training. Science. 2021 May 28; 372(6545):926. PMID: 34045348

Ching C, Zaman MH. Impact of ciprofloxacin impurities on bacterial growth, antibiotic resistance development and content assays. Lett Appl Microbiol. 2021 Aug; 73(2):220-228. PMID: 33905563

Sutradhar I, Zaman MH. Evaluation of the effect of temperature on the stability and antimicrobial activity of rifampicin quinone. J Pharm Biomed Anal. 2021 Apr 15; 197:113941.View Related Profiles.

Sutradhar, Indorica
Zaman, Muhammad

PMID: 33588300; PMCID: PMC10326799; DOI: 10.1016/j.jpba.2021.113941;

DeCamp SJ, Tsuda VMK, Ferruzzi J, Koehler SA, Giblin JT, Roblyer D, Zaman MH, Weiss ST, Kiliç A, De Marzio M, Park CY, Ogassavara NC, Mitchel JA, Butler JP, Fredberg JJ. Epithelial layer unjamming shifts energy metabolism toward glycolysis. Sci Rep. 2020 10 27; 10(1):18302.View Related Profiles.

Roblyer, Darren
Zaman, Muhammad

PMID: 33110128; PMCID: PMC7591531; DOI: 10.1038/s41598-020-74992-z;

Ching C, Orubu ESF, Sutradhar I, Wirtz VJ, Boucher HW, Zaman MH. Bacterial antibiotic resistance development and mutagenesis following exposure to subinhibitory concentrations of fluoroquinolones in vitro: a systematic review of the literature. JAC Antimicrob Resist. 2020 Sep; 2(3):dlaa068.View Related Profiles.

Sutradhar, Indorica
Zaman, Muhammad
Wirtz, Veronika

PMID: 34223024; PMCID: PMC8210091; DOI: 10.1093/jacamr/dlaa068;

Suprenant MP, Gopaluni A, Dyson MK, Al-Dheeb N, Shafique F, Zaman MH. A predictive model for healthcare coverage in Yemen. Confl Health. 2020; 14:55. PMID: 33062048; PMCID: PMC7550854; DOI: 10.1186/s13031-020-00300-1;

Higgins G, Peres J, Abdalrahman T, Zaman MH, Lang DM, Prince S, Franz T. Cytoskeletal tubulin competes with actin to increase deformability of metastatic melanoma cells. Exp Cell Res. 2020 09 15; 394(2):112154. PMID: 32598874

Ching C, Zaman MH. Development and selection of low-level multi-drug resistance over an extended range of sub-inhibitory ciprofloxacin concentrations in Escherichia coli. Sci Rep. 2020 05 29; 10(1):8754. PMID: 32471975; PMCID: PMC7260183; DOI: 10.1038/s41598-020-65602-z;

Lee SWL, Seager RJ, Litvak F, Spill F, Sieow JL, Leong PH, Kumar D, Tan ASM, Wong SC, Adriani G, Zaman MH, Kamm ARD. Integrated in silico and 3D in vitro model of macrophage migration in response to physical and chemical factors in the tumor microenvironment. Integr Biol (Camb). 2020 04 20; 12(4):90-108.View Related Profiles.

Litvak, Felix
Zaman, Muhammad

PMID: 32248236; PMCID: PMC7167463; DOI: 10.1093/intbio/zyaa007;

White JA, Gaver DP, Butera RJ, Choi B, Dunlop MJ, Grande-Allen KJ, Grosberg A, Hitchcock RW, Huang-Saad AY, Kotche M, Kyle AM, Lerner AL, Linehan JH, Linsenmeier RA, Miller MI, Papin JA, Setton L, Sgro A, Smith ML, Zaman M, Lee AP. Core Competencies for Undergraduates in Bioengineering and Biomedical Engineering: Findings, Consequences, and Recommendations. Ann Biomed Eng. 2020 Mar; 48(3):905-912.View Related Profiles.

White, John
Dunlop, Mary
Smith, Michael
Zaman, Muhammad

PMID: 32026231

Ferruzzi J, Sun M, Gkousioudi A, Pilvar A, Roblyer D, Zhang Y, Zaman MH. Compressive Remodeling Alters Fluid Transport Properties of Collagen Networks - Implications for Tumor Growth. Sci Rep. 2019 11 20; 9(1):17151.View Related Profiles.

Roblyer, Darren
Zaman, Muhammad

PMID: 31748563; PMCID: PMC6868165; DOI: 10.1038/s41598-019-50268-z;

Kim JH, Pegoraro AF, Das A, Koehler SA, Ujwary SA, Lan B, Mitchel JA, Atia L, He S, Wang K, Bi D, Zaman MH, Park JA, Butler JP, Lee KH, Starr JR, Fredberg JJ. Unjamming and collective migration in MCF10A breast cancer cell lines. Biochem Biophys Res Commun. 2020 01 15; 521(3):706-715. PMID: 31699371; PMCID: PMC6937379; DOI: 10.1016/j.bbrc.2019.10.188;

Ching C, Orubu ESF, Wirtz VJ, Zaman MH. Bacterial antibiotic resistance development and mutagenesis following exposure to subminimal inhibitory concentrations of fluoroquinolones in vitro: a systematic literature review protocol. BMJ Open. 2019 10 30; 9(10):e030747.View Related Profiles.

Zaman, Muhammad
Wirtz, Veronika

PMID: 31666265; PMCID: PMC6830604; DOI: 10.1136/bmjopen-2019-030747;

Orubu ESF, Zaman MH, Rahman MT, Wirtz VJ. Veterinary antimicrobial resistance containment in Bangladesh: Evaluating the national action plan and scoping the evidence on implementation. J Glob Antimicrob Resist. 2020 06; 21:105-115.View Related Profiles.

Zaman, Muhammad
Wirtz, Veronika

PMID: 31600599

Li A, Sun M, Spill F, Sun R, Zaman MH. Are the Effects of Independent Biophysical Factors Linearly Additive? A 3D Tumor Migration Model. Biophys J. 2019 11 05; 117(9):1702-1713. PMID: 31630809; PMCID: PMC6838959; DOI: 10.1016/j.bpj.2019.09.037;

Moed S, Zaman MH. Towards better diagnostic tools for liver injury in low-income and middle-income countries. BMJ Glob Health. 2019; 4(4):e001704. PMID: 31406595; PMCID: PMC6666799; DOI: 10.1136/bmjgh-2019-001704;

Ferrario A, Orubu ESF, Adeyeye MC, Zaman MH, Wirtz VJ. The need for comprehensive and multidisciplinary training in substandard and falsified medicines for pharmacists. BMJ Glob Health. 2019; 4(4):e001681.View Related Profiles.

Zaman, Muhammad
Wirtz, Veronika

PMID: 31406593; PMCID: PMC6666819; DOI: 10.1136/bmjgh-2019-001681;

Nadkarni D, Minocha A, Harpaldas H, Kim G, Gopaluni A, Gravelyn S, Rashid S, Helfrich A, Clifford K, Herklots T, Meguid T, Jacod B, Desai D, Zaman MH. Predicting resource-dependent maternal health outcomes at a referral hospital in Zanzibar using patient trajectories and mathematical modeling. PLoS One. 2019; 14(3):e0212753.View Related Profiles.

Zaman, Muhammad
Rashid, Sarem

PMID: 30835755; PMCID: PMC6400335; DOI: 10.1371/journal.pone.0212753;

Moed S, Zaman MH. A quantitative electrochemical assay for liver injury. Biosens Bioelectron. 2019 Apr 15; 131:74-78. PMID: 30826653

Weinstein ZB, Zaman MH. Evolution of Rifampin Resistance in Escherichia coli and Mycobacterium smegmatis Due to Substandard Drugs. Antimicrob Agents Chemother. 2019 01; 63(1).View Related Profiles.

Zaman, Muhammad
Weinstein, Zohar

PMID: 30397062; PMCID: PMC6325213; DOI: 10.1128/AAC.01243-18;

Andasari V, Lü D, Swat M, Feng S, Spill F, Chen L, Luo X, Zaman M, Long M. Computational model of wound healing: EGF secreted by fibroblasts promotes delayed re-epithelialization of epithelial keratinocytes. Integr Biol (Camb). 2018 10 15; 10(10):605-634. PMID: 30206629; PMCID: PMC6571173; DOI: 10.1039/c8ib00048d;

Kamm RD, Bashir R, Arora N, Dar RD, Gillette MU, Griffith LG, Kemp ML, Kinlaw K, Levin M, Martin AC, McDevitt TC, Nerem RM, Powers MJ, Saif TA, Sharpe J, Takayama S, Takeuchi S, Weiss R, Ye K, Yevick HG, Zaman MH. Perspective: The promise of multi-cellular engineered living systems. APL Bioeng. 2018 Dec; 2(4):040901. PMID: 31069321; PMCID: PMC6481725; DOI: 10.1063/1.5038337;

Acevedo AJ, Holt RG, Desai D, Zaman MH. Small volume method for drug release screening using ultrasonic agitation. Analyst. 2018 Sep 24; 143(19):4732-4740. PMID: 30191216; PMCID: PMC6983327; DOI: 10.1039/c8an00881g;

Weinstein ZB, Kuru N, Kiriakov S, Palmer AC, Khalil AS, Clemons PA, Zaman MH, Roth FP, Cokol M. Modeling the impact of drug interactions on therapeutic selectivity. Nat Commun. 2018 08 27; 9(1):3452.View Related Profiles.

Khalil, Ahmad
Zaman, Muhammad
Weinstein, Zohar

PMID: 30150706; PMCID: PMC6110842; DOI: 10.1038/s41467-018-05954-3;

Nadkarni D, Gravelyn S, Brova M, Rashid S, Yee R, Guttieres D, Clifford K, Desai D, Zaman M. Modeling patient access to therapeutic oxytocin in Zanzibar, Tanzania. BMC Health Serv Res. 2018 Aug 17; 18(1):645.View Related Profiles.

Zaman, Muhammad
Rashid, Sarem

PMID: 30119630; PMCID: PMC6098590; DOI: 10.1186/s12913-018-3452-8;

Reynolds DS, Bougher KM, Letendre JH, Fitzgerald SF, Gisladottir UO, Grinstaff MW, Zaman MH. Mechanical confinement via a PEG/Collagen interpenetrating network inhibits behavior characteristic of malignant cells in the triple negative breast cancer cell line MDA.MB.231. Acta Biomater. 2018 09 01; 77:85-95.View Related Profiles.

Grinstaff, Mark
Zaman, Muhammad

PMID: 30030173; PMCID: PMC6136430; DOI: 10.1016/j.actbio.2018.07.032;

Clifford K, Desai D, Prazeres da Costa C, Meyer H, Klohe K, Winkler AS, Rahman T, Islam T, Zaman MH. Antimicrobial resistance in livestock and poor quality veterinary medicines. Bull World Health Organ. 2018 Sep 01; 96(9):662-664. PMID: 30262949; PMCID: PMC6154060; DOI: 10.2471/BLT.18.209585;

Li R, Serrano JC, Xing H, Lee TA, Azizgolshani H, Zaman M, Kamm RD. Interstitial flow promotes macrophage polarization toward an M2 phenotype. Mol Biol Cell. 2018 08 08; 29(16):1927-1940. PMID: 29995595; PMCID: PMC6232969; DOI: 10.1091/mbc.E18-03-0164;

Seager RJ, Acevedo AJ, Spill F, Zaman MH. Solid dissolution in a fluid solvent is characterized by the interplay of surface area-dependent diffusion and physical fragmentation. Sci Rep. 2018 05 16; 8(1):7711. PMID: 29769553; PMCID: PMC5955930; DOI: 10.1038/s41598-018-25821-x;

Kim JE, Reynolds DS, Zaman MH, Mak M. Characterization of the mechanical properties of cancer cells in 3D matrices in response to collagen concentration and cytoskeletal inhibitors. Integr Biol (Camb). 2018 04 23; 10(4):232-241. PMID: 29620778; PMCID: PMC5916796; DOI: 10.1039/c8ib00044a;

Nadkarni D, Elhajj I, Dawy Z, Ghattas H, Zaman MH. Examining the need & potential for biomedical engineering to strengthen health care delivery for displaced populations & victims of conflict. Confl Health. 2017; 11:20. PMID: 29118849; PMCID: PMC5664437; DOI: 10.1186/s13031-017-0122-0;

Reynolds DS, Tevis KM, Blessing WA, Colson YL, Zaman MH, Grinstaff MW. Breast Cancer Spheroids Reveal a Differential Cancer Stem Cell Response to Chemotherapeutic Treatment. Sci Rep. 2017 09 04; 7(1):10382.View Related Profiles.

Grinstaff, Mark
Zaman, Muhammad

PMID: 28871147; PMCID: PMC5583341; DOI: 10.1038/s41598-017-10863-4;

Spill F, Zaman MH. Multiscale dynamics of the biophysical and biochemical microenvironment: Comment on "Cellular mechanosensing of the biophysical microenvironment: A review of mathematical models of biophysical regulation of cell responses" by Bo Cheng et al. Phys Life Rev. 2017 12; 22-23:127-129. PMID: 28781238

Seager RJ, Hajal C, Spill F, Kamm RD, Zaman MH. Dynamic interplay between tumour, stroma and immune system can drive or prevent tumour progression. Converg Sci Phys Oncol. 2017; 3. PMID: 30079253; PMCID: PMC6070160; DOI: 10.1088/2057-1739/aa7e86;

Mak M, Anderson S, McDonough MC, Spill F, Kim JE, Boussommier-Calleja A, Zaman MH, Kamm RD. Integrated Analysis of Intracellular Dynamics of MenaINV Cancer Cells in a 3D Matrix. Biophys J. 2017 May 09; 112(9):1874-1884. PMID: 28494958; PMCID: PMC5425400; DOI: 10.1016/j.bpj.2017.03.030;

Weinstein ZB, Zaman MH. Quantitative bioassay to identify antimicrobial drugs through drug interaction fingerprint analysis. Sci Rep. 2017 02 16; 7:42644.View Related Profiles.

Zaman, Muhammad
Weinstein, Zohar

PMID: 28205640; PMCID: PMC5311984; DOI: 10.1038/srep42644;

Kitching GT, J Haavik H, Tandstad BJ, Zaman M, Darj E. Exploring the Role of Ad Hoc Grassroots Organizations Providing Humanitarian Aid on Lesvos, Greece. PLoS Curr. 2016 Nov 17; 8. PMID: 28018747; PMCID: PMC5145811; DOI: 10.1371/currents.dis.bd282cd90ade7d4eb63b6bbdb1904d10;

Sun M, Zaman MH. Modeling, signaling and cytoskeleton dynamics: integrated modeling-experimental frameworks in cell migration. Wiley Interdiscip Rev Syst Biol Med. 2017 Jan; 9(1). PMID: 27863122; PMCID: PMC5338640; DOI: 10.1002/wsbm.1365;

Spill F, Weinstein ZB, Irani Shemirani A, Ho N, Desai D, Zaman MH. Controlling uncertainty in aptamer selection. Proc Natl Acad Sci U S A. 2016 10 25; 113(43):12076-12081.View Related Profiles.

Zaman, Muhammad
Weinstein, Zohar

PMID: 27790993; PMCID: PMC5087011; DOI: 10.1073/pnas.1605086113;

Vargas DA, Sun M, Sadykov K, Kukuruzinska MA, Zaman MH. The Integrated Role of Wnt/ß-Catenin, N-Glycosylation, and E-Cadherin-Mediated Adhesion in Network Dynamics. PLoS Comput Biol. 2016 Jul; 12(7):e1005007.View Related Profiles.

Kukuruzinska, Maria
Zaman, Muhammad

PMID: 27427963; PMCID: PMC4948889; DOI: 10.1371/journal.pcbi.1005007;

Spill F, Andasari V, Mak M, Kamm RD, Zaman MH. Effects of 3D geometries on cellular gradient sensing and polarization. Phys Biol. 2016 06 25; 13(3):036008. PMID: 27345945; PMCID: PMC4963243; DOI: 10.1088/1478-3975/13/3/036008;

Sun M, Spill F, Zaman MH. A Computational Model of YAP/TAZ Mechanosensing. Biophys J. 2016 Jun 07; 110(11):2540-50. PMID: 27276271; PMCID: PMC4922562; DOI: 10.1016/j.bpj.2016.04.040;

Sun M, Bloom AB, Zaman MH. Correction: Rapid Quantification of 3D Collagen Fiber Alignment and Fiber Intersection Correlations with High Sensitivity. PLoS One. 2016; 11(6):e0157379. PMID: 27272026; PMCID: PMC4896616; DOI: 10.1371/journal.pone.0157379;

Spill F, Reynolds DS, Kamm RD, Zaman MH. Impact of the physical microenvironment on tumor progression and metastasis. Curr Opin Biotechnol. 2016 Aug; 40:41-8. PMID: 26938687; PMCID: PMC4975620; DOI: 10.1016/j.copbio.2016.02.007;

Mak M, Spill F, Kamm RD, Zaman MH. Single-Cell Migration in Complex Microenvironments: Mechanics and Signaling Dynamics. J Biomech Eng. 2016 Feb; 138(2):021004. PMID: 26639083; PMCID: PMC4844084; DOI: 10.1115/1.4032188;

Clifford KL, Zaman MH. Engineering, global health, and inclusive innovation: focus on partnership, system strengthening, and local impact for SDGs. Glob Health Action. 2016; 9:30175. PMID: 26790462; PMCID: PMC4720687; DOI: 10.3402/gha.v9.30175;

Mak M, Zaman MH, Kamm RD, Kim T. Interplay of active processes modulates tension and drives phase transition in self-renewing, motor-driven cytoskeletal networks. Nat Commun. 2016; 7:10323. PMID: 26744226; PMCID: PMC4714927; DOI: 10.1038/ncomms10323;

Clifford KL, Zaman MH. Engineering, global health, and inclusive innovation: focus on partnership, system strengthening, and local impact for SDGs. Glob Health Action. 2016 Jan; 9(1):30175. PMID: 28156950; DOI: 10.3402/gha.v9.30175;

Sharma Y, Vargas DA, Pegoraro AF, Lepzelter D, Weitz DA, Zaman MH. Collective motion of mammalian cell cohorts in 3D. Integr Biol (Camb). 2015 Dec; 7(12):1526-33. PMID: 26549557; PMCID: PMC4823633; DOI: 10.1039/c5ib00208g;

Sun M, Bloom AB, Zaman MH. Rapid Quantification of 3D Collagen Fiber Alignment and Fiber Intersection Correlations with High Sensitivity. PLoS One. 2015; 10(7):e0131814. PMID: 26158674; PMCID: PMC4497681; DOI: 10.1371/journal.pone.0131814;

Mak M, Kim T, Zaman MH, Kamm RD. Multiscale mechanobiology: computational models for integrating molecules to multicellular systems. Integr Biol (Camb). 2015 Oct; 7(10):1093-108. PMID: 26019013; PMCID: PMC4677065; DOI: 10.1039/c5ib00043b;

Bourouba M, Zergoun AA, Maffei JS, Chila D, Djennaoui D, Asselah F, Amir-Tidadini ZC, Touil-Boukoffa C, Zaman MH. TNFa antagonization alters NOS2 dependent nasopharyngeal carcinoma tumor growth. Cytokine. 2015 Jul; 74(1):157-63. PMID: 25912222; DOI: 10.1016/j.cyto.2015.04.003;

Ho NT, Desai D, Zaman MH. Rapid and specific drug quality testing assay for artemisinin and its derivatives using a luminescent reaction and novel microfluidic technology. Am J Trop Med Hyg. 2015 Jun; 92(6 Suppl):24-30. PMID: 25897061; PMCID: PMC4455072; DOI: 10.4269/ajtmh.14-0392;

Zaman MH. Maternal health in developing countries: engineering approaches and future outlook. IEEE Pulse. 2015 Jan-Feb; 6(1):25-7. PMID: 25616265; DOI: 10.1109/MPUL.2014.2366894;

Mak M, Kamm RD, Zaman MH. Impact of dimensionality and network disruption on microrheology of cancer cells in 3D environments. PLoS Comput Biol. 2014 Nov; 10(11):e1003959. PMID: 25412385; PMCID: PMC4238946; DOI: 10.1371/journal.pcbi.1003959;

Wu G, Zaman MH. Amperometric measurements of ethanol on paper with a glucometer. Talanta. 2015 Mar; 134:194-9. PMID: 25618657; DOI: 10.1016/j.talanta.2014.10.061;

Maffei JS, Srivastava J, Fallica B, Zaman MH. Combinative in vitro studies and computational model to predict 3D cell migration response to drug insult. Integr Biol (Camb). 2014 Oct; 6(10):957-72. PMID: 25174457; PMCID: PMC4172491; DOI: 10.1039/c4ib00167b;

Garcia P, Armstrong R, Zaman MH. Models of education in medicine, public health, and engineering. Science. 2014 Sep 12; 345(6202):1281-3. PMID: 25214613; DOI: 10.1126/science.1258782;

Mak M, Zaman M, Kamm R. SU-E-J-41: Computational and Experimental Analysis of Cancer Cell Mechanics in 3D: Intracellular Viscoelasticity and Internal Stresses. Med Phys. 2014 Jun; 41(6):164. PMID: 28038239; DOI: 10.1118/1.4888093;

Lepzelter D, Zaman MH. Modeling persistence in mesenchymal cell motility using explicit fibers. Langmuir. 2014 May 20; 30(19):5506-9. PMID: 24800650; PMCID: PMC4334298; DOI: 10.1021/la404832t;

Bloom AB, Zaman MH. Influence of the microenvironment on cell fate determination and migration. Physiol Genomics. 2014 May 1; 46(9):309-14. PMID: 24619520; PMCID: PMC4035623; DOI: 10.1152/physiolgenomics.00170.2013;

Forciniti L, Ybarra J, Zaman MH, Schmidt CE. Schwann cell response on polypyrrole substrates upon electrical stimulation. Acta Biomater. 2014 Jun; 10(6):2423-33. PMID: 24512979; DOI: 10.1016/j.actbio.2014.01.030;

Wu G, Srivastava J, Zaman MH. Stability measurements of antibodies stored on paper. Anal Biochem. 2014 Mar 15; 449:147-54. PMID: 24361717; DOI: 10.1016/j.ab.2013.12.012;

Charoen KM, Fallica B, Colson YL, Zaman MH, Grinstaff MW. Embedded multicellular spheroids as a biomimetic 3D cancer model for evaluating drug and drug-device combinations. Biomaterials. 2014 Feb; 35(7):2264-71.View Related Profiles.

Grinstaff, Mark
Zaman, Muhammad

PMID: 24360576; PMCID: PMC3923358; DOI: 10.1016/j.biomaterials.2013.11.038;

Schwartz MP, Rogers RE, Singh SP, Lee JY, Loveland SG, Koepsel JT, Witze ES, Montanez-Sauri SI, Sung KE, Tokuda EY, Sharma Y, Everhart LM, Nguyen EH, Zaman MH, Beebe DJ, Ahn NG, Murphy WL, Anseth KS. A quantitative comparison of human HT-1080 fibrosarcoma cells and primary human dermal fibroblasts identifies a 3D migration mechanism with properties unique to the transformed phenotype. PLoS One. 2013; 8(12):e81689. PMID: 24349113; PMCID: PMC3857815; DOI: 10.1371/journal.pone.0081689;

Zaman MH. The role of engineering approaches in analysing cancer invasion and metastasis. Nat Rev Cancer. 2013 Aug; 13(8):596-603. PMID: 23864050

Vargas DA, Bates O, Zaman MH. Computational model to probe cellular mechanics during epithelial-mesenchymal transition. Cells Tissues Organs. 2013; 197(6):435-44. PMID: 23774741; DOI: 10.1159/000348415;

Katira P, Bonnecaze RT, Zaman MH. Modeling the mechanics of cancer: effect of changes in cellular and extra-cellular mechanical properties. Front Oncol. 2013; 3:145. PMID: 23781492; PMCID: PMC3678107; DOI: 10.3389/fonc.2013.00145;

Chisholm RH, Hughes BD, Landman KA, Zaman MH. Analytic study of three-dimensional single cell migration with and without proteolytic enzymes. Cell Mol Bioeng. 2013 Jun 01; 6(2). PMID: 24348878; PMCID: PMC3859246; DOI: 10.1007/s12195-012-0261-8;

Frascoli F, Hughes BD, Zaman MH, Landman KA. A computational model for collective cellular motion in three dimensions: general framework and case study for cell pair dynamics. PLoS One. 2013; 8(3):e59249. PMID: 23527148; PMCID: PMC3602115; DOI: 10.1371/journal.pone.0059249;

Harjanto D, Zaman MH. Modeling extracellular matrix reorganization in 3D environments. PLoS One. 2013; 8(1):e52509. PMID: 23341900; PMCID: PMC3544844; DOI: 10.1371/journal.pone.0052509;

Fong EJ, Sharma Y, Fallica B, Tierney DB, Fortune SM, Zaman MH. Decoupling directed and passive motion in dynamic systems: particle tracking microrheology of sputum. Ann Biomed Eng. 2013 Apr; 41(4):837-46. PMID: 23271563; PMCID: PMC3763957; DOI: 10.1007/s10439-012-0721-2;

Sakamoto Y, Prudhomme S, Zaman MH. Modeling of adhesion, protrusion, and contraction coordination for cell migration simulations. J Math Biol. 2014 Jan; 68(1-2):267-302. PMID: 23263301; DOI: 10.1007/s00285-012-0634-6;

Lepzelter D, Zaman M. Subdiffusion of proteins and oligomers on membranes. J Chem Phys. 2012 Nov 7; 137(17):175102. PMID: 23145748; PMCID: PMC3505199; DOI: 10.1063/1.4764305;

Fallica B, Maffei JS, Villa S, Makin G, Zaman M. Alteration of cellular behavior and response to PI3K pathway inhibition by culture in 3D collagen gels. PLoS One. 2012; 7(10):e48024. PMID: 23110163; PMCID: PMC3479126; DOI: 10.1371/journal.pone.0048024;

Wu G, Zaman MH. Low-cost tools for diagnosing and monitoring HIV infection in low-resource settings. Bull World Health Organ. 2012 Dec 1; 90(12):914-20. PMID: 23284197; PMCID: PMC3524957; DOI: 10.2471/BLT.12.102780;

Fernandes A, Zaman MH. The role of biomedical engineering in disaster management in resource-limited settings. Bull World Health Organ. 2012 Aug 1; 90(8):631-2. PMID: 22893748; PMCID: PMC3417780; DOI: 10.2471/BLT.12.104901;

Lepzelter D, Bates O, Zaman M. Integrin clustering in two and three dimensions. Langmuir. 2012 Mar 27; 28(12):5379-86. PMID: 22204631; PMCID: PMC3314142; DOI: 10.1021/la203725a;

Katira P, Zaman MH, Bonnecaze RT. How changes in cell mechanical properties induce cancerous behavior. Phys Rev Lett. 2012 Jan 13; 108(2):028103. PMID: 22324713

Harjanto D, Maffei JS, Zaman MH. Quantitative analysis of the effect of cancer invasiveness and collagen concentration on 3D matrix remodeling. PLoS One. 2011; 6(9):e24891. PMID: 21980363; PMCID: PMC3181246; DOI: 10.1371/journal.pone.0024891;

Sakamoto Y, Prudhomme S, Zaman MH. Viscoelastic gel-strip model for the simulation of migrating cells. Ann Biomed Eng. 2011 Nov; 39(11):2735-49. PMID: 21800204; DOI: 10.1007/s10439-011-0360-z;

Tambe DT, Hardin CC, Angelini TE, Rajendran K, Park CY, Serra-Picamal X, Zhou EH, Zaman MH, Butler JP, Weitz DA, Fredberg JJ, Trepat X. Collective cell guidance by cooperative intercellular forces. Nat Mater. 2011 Jun; 10(6):469-75. PMID: 21602808; PMCID: PMC3135682; DOI: 10.1038/nmat3025;

Baker EL, Srivastava J, Yu D, Bonnecaze RT, Zaman MH. Cancer cell migration: integrated roles of matrix mechanics and transforming potential. PLoS One. 2011; 6(5):e20355. PMID: 21647371; PMCID: PMC3103552; DOI: 10.1371/journal.pone.0020355;

Vargas DA, Zaman MH. Computational model for migration of a cell cluster in three-dimensional matrices. Ann Biomed Eng. 2011 Jul; 39(7):2068-79. PMID: 21424851

Fallica B, Makin G, Zaman MH. Bioengineering approaches to study multidrug resistance in tumor cells. Integr Biol (Camb). 2011 May; 3(5):529-39. PMID: 21387035; PMCID: PMC4437566; DOI: 10.1039/c0ib00142b;

Lepzelter D, Zaman MH. Clustered diffusion of integrins. Biophys J. 2010 Dec 15; 99(12):L106-8. PMID: 21156122; PMCID: PMC3000510; DOI: 10.1016/j.bpj.2010.11.007;

Desai D, Wu G, Zaman MH. Tackling HIV through robust diagnostics in the developing world: current status and future opportunities. Lab Chip. 2011 Jan 21; 11(2):194-211. PMID: 21125097; PMCID: PMC5181793; DOI: 10.1039/c0lc00340a;

Baker EL, Lu J, Yu D, Bonnecaze RT, Zaman MH. Cancer cell stiffness: integrated roles of three-dimensional matrix stiffness and transforming potential. Biophys J. 2010 Oct 6; 99(7):2048-57. PMID: 20923638; PMCID: PMC3042573; DOI: 10.1016/j.bpj.2010.07.051;

Wang G, Zaman MH. Communications: Hamiltonian regulated cell signaling network. J Chem Phys. 2010 Mar 28; 132(12):121103. PMID: 20370106; PMCID: PMC2859080; DOI: 10.1063/1.3357980;

Harjanto D, Zaman MH. Computational study of proteolysis-driven single cell migration in a three-dimensional matrix. Ann Biomed Eng. 2010 May; 38(5):1815-25. PMID: 20195760

Schwartz MP, Fairbanks BD, Rogers RE, Rangarajan R, Zaman MH, Anseth KS. A synthetic strategy for mimicking the extracellular matrix provides new insight about tumor cell migration. Integr Biol (Camb). 2010 Jan; 2(1):32-40. PMID: 20473410; PMCID: PMC7069545; DOI: 10.1039/b912438a;

Harjanto D, Zaman MH. Matrix mechanics and receptor-ligand interactions in cell adhesion. Org Biomol Chem. 2010 Jan 21; 8(2):299-304. PMID: 20066262

Nair AB, Kim HD, Chakraborty B, Singh J, Zaman M, Gupta A, Friden PM, Murthy SN. Ungual and trans-ungual iontophoretic delivery of terbinafine for the treatment of onychomycosis. J Pharm Sci. 2009 Nov; 98(11):4130-40. PMID: 19340887; DOI: 10.1002/jps.21711;

Baker EL, Zaman MH. The biomechanical integrin. J Biomech. 2010 Jan 5; 43(1):38-44. PMID: 19811786; PMCID: PMC2813321; DOI: 10.1016/j.jbiomech.2009.09.007;

Baker EL, Bonnecaze RT, Zaman MH. Extracellular matrix stiffness and architecture govern intracellular rheology in cancer. Biophys J. 2009 Aug 19; 97(4):1013-21. PMID: 19686648; PMCID: PMC2726313; DOI: 10.1016/j.bpj.2009.05.054;

Kness M, Wang G, Zaman MH. Robustness of integrin signaling network. J Chem Phys. 2009 Jun 21; 130(23):235103. PMID: 19548764; PMCID: PMC3982507; DOI: 10.1063/1.3149857;

Forciniti L, Schmidt CE, Zaman MH. Computational model provides insight into the distinct responses of neurons to chemical and topographical cues. Ann Biomed Eng. 2009 Feb; 37(2):363-74. PMID: 19067167; PMCID: PMC2713193; DOI: 10.1007/s10439-008-9613-x;

Yang T, Zaman MH. Cell adhesion to nanoligands: effects of ligand size and concentration in solution. Langmuir. 2008 Oct 21; 24(20):11819-27. PMID: 18816080; DOI: 10.1021/la801885c;

Harley BA, Kim HD, Zaman MH, Yannas IV, Lauffenburger DA, Gibson LJ. Microarchitecture of three-dimensional scaffolds influences cell migration behavior via junction interactions. Biophys J. 2008 Oct; 95(8):4013-24. PMID: 18621811; PMCID: PMC2553126; DOI: 10.1529/biophysj.107.122598;

Enderling H, Alexander NR, Clark ES, Branch KM, Estrada L, Crooke C, Jourquin J, Lobdell N, Zaman MH, Guelcher SA, Anderson AR, Weaver AM. Dependence of invadopodia function on collagen fiber spacing and cross-linking: computational modeling and experimental evidence. Biophys J. 2008 Sep; 95(5):2203-18. PMID: 18515372; PMCID: PMC2517013; DOI: 10.1529/biophysj.108.133199;

Rangarajan R, Zaman MH. Modeling cell migration in 3D: Status and challenges. Cell Adh Migr. 2008 Apr-May; 2(2):106-9. PMID: 19262098; PMCID: PMC2634993; DOI: 10.4161/cam.2.2.6211;

Zaman MH. Cell adhesion & migration. Cell Adh Migr. 2008 Apr-May; 2(2):53-4. PMID: 19262104; PMCID: PMC2634982; DOI: 10.4161/cam.2.2.6518;

Zaman MH. Computer simulations in connective tissue research: successes and challenges. Connect Tissue Res. 2008; 49(3):162-4. PMID: 18661334; DOI: 10.1080/03008200802151631;

Zaman MH. A multiscale probabilisitic framework to model early steps in tumor metastasis. Mol Cell Biomech. 2007 Sep; 4(3):133-41. PMID: 18320900

Yang T, Zaman MH. Free energy landscape of receptor-mediated cell adhesion. J Chem Phys. 2007 Jan 28; 126(4):045103. PMID: 17286513

Zaman MH. Understanding the molecular basis for differential binding of integrins to collagen and gelatin. Biophys J. 2007 Jan 15; 92(2):L17-9. PMID: 17098789; PMCID: PMC1751409; DOI: 10.1529/biophysj.106.097519;

Zaman MH, Matsudaira P, Lauffenburger DA. Understanding effects of matrix protease and matrix organization on directional persistence and translational speed in three-dimensional cell migration. Ann Biomed Eng. 2007 Jan; 35(1):91-100. PMID: 17080315

Wolf-Yadlin A, Kumar N, Zhang Y, Hautaniemi S, Zaman M, Kim HD, Grantcharova V, Lauffenburger DA, White FM. Effects of HER2 overexpression on cell signaling networks governing proliferation and migration. Mol Syst Biol. 2006; 2:54. PMID: 17016520; PMCID: PMC1682017; DOI: 10.1038/msb4100094;

Zaman MH, Trapani LM, Sieminski AL, Siemeski A, Mackellar D, Gong H, Kamm RD, Wells A, Lauffenburger DA, Matsudaira P. Migration of tumor cells in 3D matrices is governed by matrix stiffness along with cell-matrix adhesion and proteolysis. Proc Natl Acad Sci U S A. 2006 Jul 18; 103(29):10889-94.View Related Profiles.

Gong, Haiyan
Zaman, Muhammad

PMID: 16832052; PMCID: PMC1544144; DOI: 10.1073/pnas.0604460103;

Kumar N, Zaman MH, Kim HD, Lauffenburger DA. A high-throughput migration assay reveals HER2-mediated cell migration arising from increased directional persistence. Biophys J. 2006 Aug 15; 91(4):L32-4. PMID: 16782798; PMCID: PMC1518637; DOI: 10.1529/biophysj.106.088898;

Zaman MH. Misfolding dynamics of human prion protein. Mol Cell Biomech. 2005 Dec; 2(4):179-90. PMID: 16705864

Jha AK, Colubri A, Zaman MH, Koide S, Sosnick TR, Freed KF. Helix, sheet, and polyproline II frequencies and strong nearest neighbor effects in a restricted coil library. Biochemistry. 2005 Jul 19; 44(28):9691-702. PMID: 16008354

Zaman MH, Kamm RD, Matsudaira P, Lauffenburger DA. Computational model for cell migration in three-dimensional matrices. Biophys J. 2005 Aug; 89(2):1389-97. PMID: 15908579; PMCID: PMC1366623; DOI: 10.1529/biophysj.105.060723;

Zaman MH, Kaazempur-Mofrad MR. How flexible is alpha-actinin's rod domain? Mech Chem Biosyst. 2004 Dec; 1(4):291-302. PMID: 16783925

Zaman MH, Shen MY, Berry RS, Freed KF, Sosnick TR. Investigations into sequence and conformational dependence of backbone entropy, inter-basin dynamics and the Flory isolated-pair hypothesis for peptides. J Mol Biol. 2003 Aug 15; 331(3):693-711. PMID: 12899838

Zaman MH, Berry RS, Sosnick TR. Entropic benefit of a cross-link in protein association. Proteins. 2002 Aug 1; 48(2):341-51. PMID: 12112701

This graph shows the total number of publications by year, by first, middle/unknown, or last author.

Bar chart showing 133 publications over 23 distinct years, with a maximum of 12 publications in 2016

Bar chart showing 133 publications over 23 distinct years, with a maximum of 12 publications in 2016

Year	Publications
2002	1
2003	1
2004	1
2005	3
2006	5
2007	2
2008	7
2009	6
2010	5
2011	6
2012	8
2013	9
2014	8
2015	6
2016	12
2017	6
2018	11
2019	9
2020	7
2021	8
2022	3
2023	7
2024	2

Media Mentions
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2018 Rice 360 Inspiration Award

2015 American Institute for Medical and Biological Engineering: Fellow

2014 Institute for Advanced Studies on Science, Technology and Society: Fellow

2013 IEEE: Van Valkenburg Early Career Teaching Award

2013 IEEE-EMBS: Early Career Achievement Award

In addition to these self-described keywords below, a list of MeSH based concepts is available here.

Systems Biology of Cancer
Cell Adhesion and Migration in 3D environments
Cellular Mechanics
Applications of BME in the developing world

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