Adrian Whitty, PhD
Associate Professor
Boston University College of Arts and Sciences
Chemistry

PhD, University of Illinois, Chicago
MS, University of Illinois, Chicago
BSc, King's College London



Professor Whitty received his Ph.D. in Organic Chemistry in 1991 from the University of Illinois at Chicago, followed by postdoctoral work with William P. Jencks at Brandeis University. Prior to joining the Boston University faculty in 2008, Adrian Whitty worked for 14 years at Biogen Idec (then Biogen Inc.). He rose from staff Scientist to the position of Director in the Drug Discovery Department and Head of Physical Biochemistry, leading a department that encompassed Quantitative Biochemistry, Assay Development and Compound Profiling, Structural Biology, and Molecular Modeling. During his time at Biogen Idec Prof. Whitty participated in or led multiple drug discovery project teams. He also maintained an active research program in the areas of receptor signaling and protein-ligand binding. He additionally directed the Biogen Idec Postdoctoral Program, developing a sterling reputation as a post-doctoral mentor.

The Whitty Group studies protein-protein and protein-ligand recognition, with an emphasis on how binding energy from these intermolecular interactions can be utilized to achieve biological function or inhibition. We apply this research in two distinct areas: (i) developing a quantitative, mechanistic understanding of the activation and signaling of growth factor receptors, and (ii) advancing our ability to discover drugs that inhibit protein-protein interactions.

Activation and signaling mechanisms in growth factor receptor systems: This work aims to address longstanding mechanistic questions concerning exactly how the binding of a cytokine or growth factor brings about an activated state of its receptor, and how the assembly of the activated receptor complex is quantitatively coupled to proximal and distal signaling events and to the ultimate cellular response (See Schlee et al., Nature Chemical Biology, 2006).

Discovery and characterization of small molecule (i.e. synthetic organic) inhibitors of protein-protein interactions: We aim to develop new approaches to this difficult problem, based on achieving a better understanding of what structural and physicochemical properties at protein-protein interfaces are important for inhibitor binding, and what kinds of novel chemical structures are best suited to exploit these features. Projects in this area are carried out in collaboration multiple other groups encompassing computational chemistry (Prof. Vajda), organic synthesis (Profs. Porco, Beeler, CMLD-BU; Prof. Pollastri, Northeastern U.), X-ray crystallography (Prof. Allen) and Biology (Prof. Gilmore, BU Department of Biology).

Techniques & Resources:

Development and implementation of biochemical and cell-based assays using state-of-the art technologies such as FRET, Time-Resolved Fluorescence, and Fluorescence Polarization.

Biophysical methods – the lab is equipped with a Biacore 3000 surface plasmon resonance (SPR) instrument for measuring protein-ligand binding in real time. Other biophysical methods used include fluorescence, analytical ultracentrifugation (AUC), dynamic lightscattering (DLS) and isothermal titration calorimetry (ITC).

Mammalian Cell Culture – the lab has a dedicated Tissue Culture facility equipped with laminar flow biosafety cabinet, cell incubators, centrifuge, Nikon inverted microscope, and liquid nitrogen cell storage system.

Specialized techniques for cell analysis (e.g. flow cytometry using a Becton-Dickinson FACSCaliburTM)

Quantitative data analysis, curve fitting and reaction pathway modeling using a variety of software packages including site licenses to MathematicaTM and MatLab®.

Member
Boston University
Evans Center for Interdisciplinary Biomedical Research




APPLY MACROCYCLE ANALYSIS METHODOLOGY TO CYCLIC PEPTIDE CHEMOTYPES
09/02/2019 - 12/31/2023 (PI)
Genentech, Inc.


Acquisition of a Surface Plasmon Resonance Instrument
09/01/2022 - 08/31/2023 (PI)
NIH/Office of the Director
1S10OD032356-01

Molecular mechanism of action of T-cell engaging antibody circuits (TEACS)
08/10/2020 - 08/10/2022 (PI)
Revitope, Inc.


Molecular Mechanism of the NFkappaB Essential Modulator (NEMO) Scaffold Protein Mutated in Human Immunodeficiencies
08/15/2016 - 06/30/2021 (PI)
NIH/National Institute of General Medical Sciences
5R01GM117350-04

Generation of Reporter Gene Cell Line for Neublastin (NBN)
01/01/2014 - 06/11/2019 (PI)
Biogen Idec


Activation and Signaling Mechanism of the RET Tyrosine Kinase Receptor (NRSA Fellowship for Jennifer Chow)
09/12/2016 - 09/11/2017 (PI)
NIH/National Cancer Institute
4F31CA177224-04

Activation and Signaling Mechanism of the RET Tyrosine Kinase Receptor (NRSA Fellowship for Jennifer Chow)
09/12/2013 - 09/11/2016 (PI)
NIH/National Cancer Institute
5F31CA177224-03

Software for Fragment Based Design of Covalent Inhibitors
09/10/2014 - 09/09/2016 (Subcontract PI)
Acpharis, Inc. NIH NIGMS
1R43GM109555-01A1

Discovery of Small Molecule Drug Candidates That Disrupt the NEMO/IKK Signaling Complex
08/05/2013 - 07/31/2016 (Subcontract PI)
Carmot Therapeutics, Inc. NIH NCI
5R44CA153676-03

Design of Macrocyclic Inhibitors of the NEMO/IKKa/b Protein-Protein Interaction
09/01/2010 - 07/31/2016 (PI)
NIH/National Institute of General Medical Sciences
5R01GM094551-04

Showing 10 of 11 results. Show All Results


Title


Yr Title Project-Sub Proj Pubs
2022 Acquisition of a Surface Plasmon Resonance Instrument 1S10OD032356-01
2019 Molecular Mechanism of the NFkappaB Essential Modulator (NEMO) Scaffold Protein Mutated in Human Immunodeficiencies 5R01GM117350-04 1
2018 Molecular Mechanism of the NFkappaB Essential Modulator (NEMO) Scaffold Protein Mutated in Human Immunodeficiencies 3R01GM117350-03S1 1
2018 Molecular Mechanism of the NFkappaB Essential Modulator (NEMO) Scaffold Protein Mutated in Human Immunodeficiencies 5R01GM117350-03 1
2017 Molecular Mechanism of the NFkappaB Essential Modulator (NEMO) Scaffold Protein Mutated in Human Immunodeficiencies 5R01GM117350-02 1
2016 Molecular Mechanism of the NFkappaB Essential Modulator (NEMO) Scaffold Protein Mutated in Human Immunodeficiencies 1R01GM117350-01A1 1
2013 Design of Macrocyclic Inhibitors of the NEMO/IKKa/b Protein-Protein Interaction 5R01GM094551-04 16
2013 Quantitative Analysis of RET Receptor Activation and Signaling 5R01GM087469-04 5
2012 Design of Macrocyclic Inhibitors of the NEMO/IKKa/b Protein-Protein Interaction 5R01GM094551-03 16
2012 Quantitative Analysis of RET Receptor Activation and Signaling 5R01GM087469-03 5
Showing 10 of 15 results. Show All Results

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.

iCite Analysis       Copy PMIDs To Clipboard

  1. Muellers SN, Allen KN, Whitty A. MEnTaT: A machine-learning approach for the identification of mutations to increase protein stability. Proc Natl Acad Sci U S A. 2023 Dec 05; 120(49):e2309884120. PMID: 38039271; PMCID: PMC10710055; DOI: 10.1073/pnas.2309884120;
     
  2. DiRusso CJ, DeMaria AM, Wong J, Wang W, Jordanides JJ, Whitty A, Allen KN, Gilmore TD. A conserved core region of the scaffold NEMO is essential for signal-induced conformational change and liquid-liquid phase separation. J Biol Chem. 2023 Dec; 299(12):105396.View Related Profiles. PMID: 37890781; PMCID: PMC10694592; DOI: 10.1016/j.jbc.2023.105396;
     
  3. DiRusso CJ, DeMaria AM, Wong J, Jordanides JJ, Whitty A, Allen KN, Gilmore TD. A Conserved Core Region of the Scaffold NEMO is Essential for Signal-induced Conformational Change and Liquid-liquid Phase Separation. bioRxiv. 2023 May 25.View Related Profiles. PMID: 37292615; PMCID: PMC10245932; DOI: 10.1101/2023.05.25.542299;
     
  4. Ignatov M, Jindal A, Kotelnikov S, Beglov D, Posternak G, Tang X, Maisonneuve P, Poda G, Batey RA, Sicheri F, Whitty A, Tonge PJ, Vajda S, Kozakov D. High Accuracy Prediction of PROTAC Complex Structures. J Am Chem Soc. 2023 Apr 05; 145(13):7123-7135.View Related Profiles. PMID: 36961978; PMCID: PMC10240388; DOI: 10.1021/jacs.2c09387;
     
  5. Ignatov M, Jindal A, Kotelnikov S, Beglov D, Posternak G, Tang X, Maisonneuve P, Poda G, Batey RA, Sicheri F, Whitty A, Tonge PJ, Vajda S, Kozakov D. High Accuracy Prediction of PROTAC Complex Structures. J Am Chem Soc. 2023 Apr 05; 145(13):7123-7135.View Related Profiles. PMID: 36961978; PMCID: PMC10240388; DOI: 10.1021/jacs.2c09387;
     
  6. Rzepiela AA, Viarengo-Baker LA, Tatarskii V, Kombarov R, Whitty A. Conformational Effects on the Passive Membrane Permeability of Synthetic Macrocycles. J Med Chem. 2022 Aug 11; 65(15):10300-10317. PMID: 35861996
     
  7. Cate RL, di Clemente N, Racine C, Groome NP, Pepinsky RB, Whitty A. The anti-Müllerian hormone prodomain is displaced from the hormone/prodomain complex upon bivalent binding to the hormone receptor. J Biol Chem. 2022 01; 298(1):101429. PMID: 34801555; PMCID: PMC8801479; DOI: 10.1016/j.jbc.2021.101429;
     
  8. Ortet PC, Muellers SN, Viarengo-Baker LA, Streu K, Szymczyna BR, Beeler AB, Allen KN, Whitty A. Recapitulating the Binding Affinity of Nrf2 for KEAP1 in a Cyclic Heptapeptide, Guided by NMR, X-ray Crystallography, and Machine Learning. J Am Chem Soc. 2021 03 17; 143(10):3779-3793.View Related Profiles. PMID: 33683866
     
  9. Viarengo-Baker LA, Brown LE, Rzepiela AA, Whitty A. Defining and navigating macrocycle chemical space. Chem Sci. 2021 Mar 04; 12(12):4309-4328.View Related Profiles. PMID: 34163695; PMCID: PMC8179434; DOI: 10.1039/d0sc05788f;
     
  10. Wakefield AE, Yueh C, Beglov D, Castilho MS, Kozakov D, Keseru GM, Whitty A, Vajda S. Benchmark Sets for Binding Hot Spot Identification in Fragment-Based Ligand Discovery. J Chem Inf Model. 2020 12 28; 60(12):6612-6623.View Related Profiles. PMID: 33291870; PMCID: PMC8200320; DOI: 10.1021/acs.jcim.0c00877;
     
Showing 10 of 81 results. Show More

This graph shows the total number of publications by year, by first, middle/unknown, or last author.

Bar chart showing 80 publications over 27 distinct years, with a maximum of 8 publications in 2015

YearPublications
19952
19972
19985
19996
20002
20014
20024
20032
20054
20064
20071
20082
20092
20102
20114
20123
20133
20142
20158
20161
20171
20183
20193
20202
20213
20221
20234

Contact for Mentoring:

590 Commonwealth Ave
Boston MA 02215
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