Martin Thunemann | Profiles RNS

Martin Thunemann, PhD

Research Assistant Professor

Boston University College of Engineering

Biomedical Engineering

PhD, Eberhard Karls Universität Tübingen

Websites

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	Neurovascular Imaging Laboratory
	College of Engineering Faculty

ORCID : 0000-0003-4139-079X

Dr. Martin Thunemann joined the department of Biomedical Engineering at BU in 2020. He received his PhD in Biochemistry from Eberhard Karls Universität Tübingen, Germany. During his graduate studies, Dr. Thunemann gained extensive knowledge in molecular biology, cell culture, cardiovascular physiology, mouse transgenesis and the Cre/lox system. He joined Dr. Devor laboratory at UCSD in 2015, first as a postdoctoral fellow, later – as a Project Scientist. He has been leading a number of bioengineering efforts including those based on multiphoton imaging and multiplexed electrophysiological recordings in awake behaving mice.

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.

iCite Analysis Copy PMIDs To Clipboard

Krogsgaard A, Sperling L, Dahlqvist M, Thomsen K, Vydmantaite G, Li F, Thunemann M, Lauritzen M, Lind BL. PV interneurons evoke astrocytic Ca2+ responses in awake mice, which contributes to neurovascular coupling. Glia. 2023 Mar 30. PMID: 36994892

Yao P, Liu R, Broginni T, Thunemann M, Kleinfeld D. Guide to the construction and use of an adaptive optics two-photon microscope with direct wavefront sensing. bioRxiv. 2023 Jan 24. PMID: 36747816; PMCID: PMC9900836; DOI: 10.1101/2023.01.24.525307;

Wilson MN, Thunemann M, Liu X, Lu Y, Puppo F, Adams JW, Kim JH, Ramezani M, Pizzo DP, Djurovic S, Andreassen OA, Mansour AA, Gage FH, Muotri AR, Devor A, Kuzum D. Multimodal monitoring of human cortical organoids implanted in mice reveal functional connection with visual cortex. Nat Commun. 2022 Dec 26; 13(1):7945.View Related Profiles.

Devor, Anna
Thunemann, Martin

PMID: 36572698; PMCID: PMC9792589; DOI: 10.1038/s41467-022-35536-3;

Mächler P, Fomin-Thunemann N, Thunemann M, Sætra MJ, Desjardins M, Kiliç K, Amra LN, Martin EA, Chen IA, Sencan-Egilmez I, Li B, Saisan P, Jiang JX, Cheng Q, Weldy KL, Boas DA, Buxton RB, Einevoll GT, Dale AM, Sakadžic S, Devor A. Baseline oxygen consumption decreases with cortical depth. PLoS Biol. 2022 Oct; 20(10):e3001440.View Related Profiles.

Devor, Anna
Boas, David
Thunemann, Martin

PMID: 36301995; PMCID: PMC9642908; DOI: 10.1371/journal.pbio.3001440;

Sauter M, Sauter RJ, Olbrich M, Thunemann M, Feil S, Feil R, Langer HF. Protocol to visualize CD11c+ cells in atherosclerosis using LacZ reporter mice. STAR Protoc. 2022 Sep 16; 3(3):101645. PMID: 36042879; PMCID: PMC9420394; DOI: 10.1016/j.xpro.2022.101645;

Abdelfattah AS, Ahuja S, Akkin T, Allu SR, Brake J, Boas DA, Buckley EM, Campbell RE, Chen AI, Cheng X, Cižmár T, Costantini I, De Vittorio M, Devor A, Doran PR, El Khatib M, Emiliani V, Fomin-Thunemann N, Fainman Y, Fernandez-Alfonso T, Ferri CGL, Gilad A, Han X, Harris A, Hillman EMC, Hochgeschwender U, Holt MG, Ji N, Kiliç K, Lake EMR, Li L, Li T, Mächler P, Miller EW, Mesquita RC, Nadella KMNS, Nägerl UV, Nasu Y, Nimmerjahn A, Ondrácková P, Pavone FS, Perez Campos C, Peterka DS, Pisano F, Pisanello F, Puppo F, Sabatini BL, Sadegh S, Sakadzic S, Shoham S, Shroff SN, Silver RA, Sims RR, Smith SL, Srinivasan VJ, Thunemann M, Tian L, Tian L, Troxler T, Valera A, Vaziri A, Vinogradov SA, Vitale F, Wang LV, Uhlírová H, Xu C, Yang C, Yang MH, Yellen G, Yizhar O, Zhao Y. Neurophotonic tools for microscopic measurements and manipulation: status report. Neurophotonics. 2022 Jan; 9(Suppl 1):013001.View Related Profiles.

Devor, Anna
Boas, David
Thunemann, Martin

PMID: 35493335; PMCID: PMC9047450; DOI: 10.1117/1.NPh.9.S1.013001;

Lee SH, Thunemann M, Lee K, Cleary DR, Tonsfeldt KJ, Oh H, Azzazy F, Tchoe Y, Bourhis AM, Hossain L, Ro YG, Tanaka A, Kiliç K, Devor A, Dayeh SA. Scalable Thousand Channel Penetrating Microneedle Arrays on Flex for Multimodal and Large Area Coverage BrainMachine Interfaces. Adv Funct Mater. 2022 Jun 17; 32(25). PMID: 36381629; PMCID: PMC9648634; DOI: 10.1002/adfm.202112045;

Sauter M, Sauter RJ, Nording H, Lin C, Olbrich M, Autenrieth S, Gleissner C, Thunemann M, Otero N, Lutgens E, Aherrahrou Z, Wolf D, Zender L, Meuth S, Feil R, Langer HF. Apolipoprotein E derived from CD11c+ cells ameliorates atherosclerosis. iScience. 2022 Jan 21; 25(1):103677. PMID: 35036868; PMCID: PMC8749187; DOI: 10.1016/j.isci.2021.103677;

Puppo F, Sadegh S, Trujillo CA, Thunemann M, Campbell EP, Vandenberghe M, Shan X, Akkouh IA, Miller EW, Bloodgood BL, Silva GA, Dale AM, Einevoll GT, Djurovic S, Andreassen OA, Muotri AR, Devor A. All-Optical Electrophysiology in hiPSC-Derived Neurons With Synthetic Voltage Sensors. Front Cell Neurosci. 2021; 15:671549.View Related Profiles.

Devor, Anna
Thunemann, Martin

PMID: 34122014; PMCID: PMC8193062; DOI: 10.3389/fncel.2021.671549;

Mächler P, Broggini T, Mateo C, Thunemann M, Fomin-Thunemann N, Doran PR, Sencan I, Kilic K, Desjardins M, Uhlirova H, Yaseen MA, Boas DA, Linninger AA, Vergassola M, Yu X, Lewis LD, Polimeni JR, Rosen BR, Sakadžic S, Buxton RB, Lauritzen M, Kleinfeld D, Devor A. A Suite of Neurophotonic Tools to Underpin the Contribution of Internal Brain States in fMRI. Curr Opin Biomed Eng. 2021 Jun; 18.View Related Profiles.

Devor, Anna
Boas, David
Lewis, Laura
Thunemann, Martin

PMID: 33959688; PMCID: PMC8095678; DOI: 10.1016/j.cobme.2021.100273;

Showing 10 of 41 results. Show More

Kiliç K, Desjardins M, Tang J, Thunemann M, Sunil S, Erdener SE, Postnov DD, Boas DA, Devor A. Chronic Cranial Windows for Long Term Multimodal Neurovascular Imaging in Mice. Front Physiol. 2020; 11:612678.View Related Profiles.

Devor, Anna
Boas, David
Thunemann, Martin

PMID: 33551837; PMCID: PMC7862556; DOI: 10.3389/fphys.2020.612678;

Rogers N, Thunemann M, Devor A, Gilja V. Impact of Brain Surface Boundary Conditions on Electrophysiology and Implications for Electrocorticography. Front Neurosci. 2020; 14:763.View Related Profiles.

Devor, Anna
Thunemann, Martin

PMID: 32903652; PMCID: PMC7438758; DOI: 10.3389/fnins.2020.00763;

Sadegh S, Yang MH, Ferri CGL, Thunemann M, Saisan PA, Wei Z, Rodriguez EA, Adams SR, Kiliç K, Boas DA, Sakadžic S, Devor A, Fainman Y. Efficient non-degenerate two-photon excitation for fluorescence microscopy. Opt Express. 2019 Sep 30; 27(20):28022-28035.View Related Profiles.

Devor, Anna
Boas, David
Thunemann, Martin

PMID: 31684560; PMCID: PMC6825618; DOI: 10.1364/OE.27.028022;

Ganji M, Paulk AC, Yang JC, Vahidi NW, Lee SH, Liu R, Hossain L, Arneodo EM, Thunemann M, Shigyo M, Tanaka A, Ryu SB, Lee SW, Tchoe Y, Marsala M, Devor A, Cleary DR, Martin JR, Oh H, Gilja V, Gentner TQ, Fried SI, Halgren E, Cash SS, Dayeh SA. Selective Formation of Porous Pt Nanorods for Highly Electrochemically Efficient Neural Electrode Interfaces. Nano Lett. 2019 09 11; 19(9):6244-6254.View Related Profiles.

Devor, Anna
Thunemann, Martin

PMID: 31369283; PMCID: PMC7174248; DOI: 10.1021/acs.nanolett.9b02296;

Sadegh S, Yang MH, Ferri CGL, Thunemann M, Saisan PA, Devor A, Fainman Y. Measurement of the relative non-degenerate two-photon absorption cross-section for fluorescence microscopy. Opt Express. 2019 Mar 18; 27(6):8335-8347.View Related Profiles.

Devor, Anna
Thunemann, Martin

PMID: 31052653; PMCID: PMC6825612; DOI: 10.1364/OE.27.008335;

Li B, Ohtomo R, Thunemann M, Adams SR, Yang J, Fu B, Yaseen MA, Ran C, Polimeni JR, Boas DA, Devor A, Lo EH, Arai K, Sakadžic S. Two-photon microscopic imaging of capillary red blood cell flux in mouse brain reveals vulnerability of cerebral white matter to hypoperfusion. J Cereb Blood Flow Metab. 2020 03; 40(3):501-512.View Related Profiles.

Devor, Anna
Boas, David
Thunemann, Martin

PMID: 30829101; PMCID: PMC7026840; DOI: 10.1177/0271678X19831016;

Rogers N, Hermiz J, Ganji M, Kaestner E, Kiliç K, Hossain L, Thunemann M, Cleary DR, Carter BS, Barba D, Devor A, Halgren E, Dayeh SA, Gilja V. Correlation Structure in Micro-ECoG Recordings is Described by Spatially Coherent Components. PLoS Comput Biol. 2019 02; 15(2):e1006769.View Related Profiles.

Devor, Anna
Thunemann, Martin

PMID: 30742605; PMCID: PMC6386410; DOI: 10.1371/journal.pcbi.1006769;

Proetto MT, Sanning J, Peterlechner M, Thunemann M, Stegemann L, Sadegh S, Devor A, Gianneschi NC, Strassert CA. Phosphorescent Pt(ii) complexes spatially arrayed in micellar polymeric nanoparticles providing dual readout for multimodal imaging. Chem Commun (Camb). 2019 Jan 03; 55(4):501-504.View Related Profiles.

Devor, Anna
Thunemann, Martin

PMID: 30556084; PMCID: PMC6462434; DOI: 10.1039/c8cc06347h;

Desjardins M, Kiliç K, Thunemann M, Mateo C, Holland D, Ferri CGL, Cremonesi JA, Li B, Cheng Q, Weldy KL, Saisan PA, Kleinfeld D, Komiyama T, Liu TT, Bussell R, Wong EC, Scadeng M, Dunn AK, Boas DA, Sakadžic S, Mandeville JB, Buxton RB, Dale AM, Devor A. Awake Mouse Imaging: From Two-Photon Microscopy to Blood Oxygen Level-Dependent Functional Magnetic Resonance Imaging. Biol Psychiatry Cogn Neurosci Neuroimaging. 2019 06; 4(6):533-542.View Related Profiles.

Devor, Anna
Boas, David
Thunemann, Martin

PMID: 30691968; PMCID: PMC6556427; DOI: 10.1016/j.bpsc.2018.12.002;

Wen L, Feil S, Wolters M, Thunemann M, Regler F, Schmidt K, Friebe A, Olbrich M, Langer H, Gawaz M, de Wit C, Feil R. Publisher Correction: A shear-dependent NO-cGMP-cGKI cascade in platelets acts as an auto-regulatory brake of thrombosis. Nat Commun. 2018 11 20; 9(1):4969. PMID: 30459325; PMCID: PMC6244154; DOI: 10.1038/s41467-018-07409-1;

Ganji M, Hossain L, Tanaka A, Thunemann M, Halgren E, Gilja V, Devor A, Dayeh SA. Monolithic and Scalable Au Nanorod Substrates Improve PEDOT-Metal Adhesion and Stability in Neural Electrodes. Adv Healthc Mater. 2018 11; 7(22):e1800923.View Related Profiles.

Devor, Anna
Thunemann, Martin

PMID: 30369088; PMCID: PMC6387627; DOI: 10.1002/adhm.201800923;

Wen L, Feil S, Wolters M, Thunemann M, Regler F, Schmidt K, Friebe A, Olbrich M, Langer H, Gawaz M, de Wit C, Feil R. A shear-dependent NO-cGMP-cGKI cascade in platelets acts as an auto-regulatory brake of thrombosis. Nat Commun. 2018 10 16; 9(1):4301. PMID: 30327468; PMCID: PMC6191445; DOI: 10.1038/s41467-018-06638-8;

Kulkarni RU, Vandenberghe M, Thunemann M, James F, Andreassen OA, Djurovic S, Devor A, Miller EW. In Vivo Two-Photon Voltage Imaging with Sulfonated Rhodamine Dyes. ACS Cent Sci. 2018 Oct 24; 4(10):1371-1378.View Related Profiles.

Devor, Anna
Thunemann, Martin

PMID: 30410975; PMCID: PMC6202643; DOI: 10.1021/acscentsci.8b00422;

Thunemann M, Lu Y, Liu X, Kiliç K, Desjardins M, Vandenberghe M, Sadegh S, Saisan PA, Cheng Q, Weldy KL, Lyu H, Djurovic S, Andreassen OA, Dale AM, Devor A, Kuzum D. Deep 2-photon imaging and artifact-free optogenetics through transparent graphene microelectrode arrays. Nat Commun. 2018 05 23; 9(1):2035.View Related Profiles.

Devor, Anna
Thunemann, Martin

PMID: 29789548; PMCID: PMC5964174; DOI: 10.1038/s41467-018-04457-5;

Uhlirova H, Tian P, Kiliç K, Thunemann M, Sridhar VB, Chmelik R, Bartsch H, Dale AM, Devor A, Saisan PA. Neurovascular Network Explorer 2.0: A Simple Tool for Exploring and Sharing a Database of Optogenetically-evoked Vasomotion in Mouse Cortex In Vivo. J Vis Exp. 2018 05 04; (135).View Related Profiles.

Devor, Anna
Thunemann, Martin

PMID: 29782006; PMCID: PMC6101108; DOI: 10.3791/57214;

Thunemann M, Schörg BF, Feil S, Lin Y, Voelkl J, Golla M, Vachaviolos A, Kohlhofer U, Quintanilla-Martinez L, Olbrich M, Ehrlichmann W, Reischl G, Griessinger CM, Langer HF, Gawaz M, Lang F, Schäfers M, Kneilling M, Pichler BJ, Feil R. Cre/lox-assisted non-invasive in vivo tracking of specific cell populations by positron emission tomography. Nat Commun. 2017 09 05; 8(1):444. PMID: 28874662; PMCID: PMC5585248; DOI: 10.1038/s41467-017-00482-y;

Füger P, Hefendehl JK, Veeraraghavalu K, Wendeln AC, Schlosser C, Obermüller U, Wegenast-Braun BM, Neher JJ, Martus P, Kohsaka S, Thunemann M, Feil R, Sisodia SS, Skodras A, Jucker M. Microglia turnover with aging and in an Alzheimer's model via long-term in vivo single-cell imaging. Nat Neurosci. 2017 Oct; 20(10):1371-1376. PMID: 28846081; DOI: 10.1038/nn.4631;

Uhlirova H, Tian P, Kiliç K, Thunemann M, Sridhar VB, Bartsch H, Dale AM, Devor A, Saisan PA. Neurovascular Network Explorer 2.0: A Database of 2-Photon Single-Vessel Diameter Measurements from Mouse SI Cortex in Response To Optogenetic Stimulation. Front Neuroinform. 2017; 11:4.View Related Profiles.

Devor, Anna
Thunemann, Martin

PMID: 28203155; PMCID: PMC5285378; DOI: 10.3389/fninf.2017.00004;

Uhlirova H, Kiliç K, Tian P, Sakadžic S, Gagnon L, Thunemann M, Desjardins M, Saisan PA, Nizar K, Yaseen MA, Hagler DJ, Vandenberghe M, Djurovic S, Andreassen OA, Silva GA, Masliah E, Kleinfeld D, Vinogradov S, Buxton RB, Einevoll GT, Boas DA, Dale AM, Devor A. The roadmap for estimation of cell-type-specific neuronal activity from non-invasive measurements. Philos Trans R Soc Lond B Biol Sci. 2016 10 05; 371(1705).View Related Profiles.

Devor, Anna
Boas, David
Thunemann, Martin

PMID: 27574309; PMCID: PMC5003857; DOI: 10.1098/rstb.2015.0356;

Uhlirova H, Kiliç K, Tian P, Thunemann M, Desjardins M, Saisan PA, Sakadžic S, Ness TV, Mateo C, Cheng Q, Weldy KL, Razoux F, Vandenberghe M, Cremonesi JA, Ferri CG, Nizar K, Sridhar VB, Steed TC, Abashin M, Fainman Y, Masliah E, Djurovic S, Andreassen OA, Silva GA, Boas DA, Kleinfeld D, Buxton RB, Einevoll GT, Dale AM, Devor A. Cell type specificity of neurovascular coupling in cerebral cortex. Elife. 2016 05 31; 5.View Related Profiles.

Devor, Anna
Boas, David
Thunemann, Martin

PMID: 27244241; PMCID: PMC4933561; DOI: 10.7554/eLife.14315;

Dhayade S, Kaesler S, Sinnberg T, Dobrowinski H, Peters S, Naumann U, Liu H, Hunger RE, Thunemann M, Biedermann T, Schittek B, Simon HU, Feil S, Feil R. Sildenafil Potentiates a cGMP-Dependent Pathway to Promote Melanoma Growth. Cell Rep. 2016 Mar 22; 14(11):2599-610. PMID: 26971999; DOI: 10.1016/j.celrep.2016.02.028;

Shuhaibar LC, Egbert JR, Norris RP, Lampe PD, Nikolaev VO, Thunemann M, Wen L, Feil R, Jaffe LA. Intercellular signaling via cyclic GMP diffusion through gap junctions restarts meiosis in mouse ovarian follicles. Proc Natl Acad Sci U S A. 2015 Apr 28; 112(17):5527-32. PMID: 25775542; PMCID: PMC4418852; DOI: 10.1073/pnas.1423598112;

Thunemann M, Schmidt K, de Wit C, Han X, Jain RK, Fukumura D, Feil R. Correlative intravital imaging of cGMP signals and vasodilation in mice. Front Physiol. 2014; 5:394. PMID: 25352809; PMCID: PMC4196583; DOI: 10.3389/fphys.2014.00394;

Samanta A, Thunemann M, Feil R, Stafforst T. Upon the photostability of 8-nitro-cGMP and its caging as a 7-dimethylaminocoumarinyl ester. Chem Commun (Camb). 2014 Jul 11; 50(54):7120-3. PMID: 24853653; DOI: 10.1039/c4cc02828g;

Kröner C, Thunemann M, Vollmer S, Kinzer M, Feil R, Richert C. Endless: a purine-binding RNA motif that can be expressed in cells. Angew Chem Int Ed Engl. 2014 Aug 25; 53(35):9198-202. PMID: 25045108; DOI: 10.1002/anie.201403579;

Feil S, Krauss J, Thunemann M, Feil R. Genetic inducible fate mapping in adult mice using tamoxifen-dependent Cre recombinases. Methods Mol Biol. 2014; 1194:113-39. PMID: 25064100; DOI: 10.1007/978-1-4939-1215-5_6;

Thunemann M, Wen L, Hillenbrand M, Vachaviolos A, Feil S, Ott T, Han X, Fukumura D, Jain RK, Russwurm M, de Wit C, Feil R. Transgenic mice for cGMP imaging. Circ Res. 2013 Aug 02; 113(4):365-71. PMID: 23801067; PMCID: PMC3896241; DOI: 10.1161/CIRCRESAHA.113.301063;

Thunemann M, Fomin N, Krawutschke C, Russwurm M, Feil R. Visualization of cGMP with cGi biosensors. Methods Mol Biol. 2013; 1020:89-120. PMID: 23709028; DOI: 10.1007/978-1-62703-459-3_6;

Müller PM, Gnügge R, Dhayade S, Thunemann M, Krippeit-Drews P, Drews G, Feil R. H2O2 lowers the cytosolic Ca²? concentration via activation of cGMP-dependent protein kinase Ia. Free Radic Biol Med. 2012 Oct 15; 53(8):1574-83. PMID: 22922339; DOI: 10.1016/j.freeradbiomed.2012.08.011;

Fischer K, Sossi V, Schmid A, Thunemann M, Maier FC, Judenhofer MS, Mannheim JG, Reischl G, Pichler BJ. Noninvasive nuclear imaging enables the in vivo quantification of striatal dopamine receptor expression and raclopride affinity in mice. J Nucl Med. 2011 Jul; 52(7):1133-41. PMID: 21680681; DOI: 10.2967/jnumed.110.086942;

Föller M, Feil S, Ghoreschi K, Koka S, Gerling A, Thunemann M, Hofmann F, Schuler B, Vogel J, Pichler B, Kasinathan RS, Nicolay JP, Huber SM, Lang F, Feil R. Anemia and splenomegaly in cGKI-deficient mice. Proc Natl Acad Sci U S A. 2008 May 06; 105(18):6771-6. PMID: 18443297; PMCID: PMC2373362; DOI: 10.1073/pnas.0708940105;

This graph shows the total number of publications by year, by first, middle/unknown, or last author.

Bar chart showing 41 publications over 14 distinct years, with a maximum of 7 publications in 2018

Bar chart showing 41 publications over 14 distinct years, with a maximum of 7 publications in 2018

Year	Publications
2008	1
2011	1
2012	1
2013	2
2014	4
2015	1
2016	3
2017	3
2018	7
2019	6
2020	1
2021	4
2022	5
2023	2

2015 Preis für Biochemie an der Universität Tübingen der Elisabeth und Franz Knoop Stiftung

2014 Rudolf-Buchheim-Preis der DGPT

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