Huimin Cheng, PhD
Assistant Professor
Boston University School of Public Health
Biostatistics

PhD, University of Georgia
MS, Central University of Finance and Economics
BS, Hubei University of Economics



My research is highly interdisciplinary. My methodological research focuses on LLM, machine learning, statistical network analysis, deep learning, and causal inference. I modeled the generating process of a network from both non-parametric (e.g., graphon model) and parametric (e.g., SBM) perspectives. I have developed various methods, including network cross-validation, network sampling, network ANOVA, and graphon convolutional network.

I also work closely with biophysicists, engineers, computer scientists, political scientists, public health scientists, and sociologists to solve scientific problems arising from various disciplines. (1) Single-molecule and nanotechnology research. We analyzed single-molecule force spectroscopy data to reveal the binding modes in intermolecular analysis. The proposed method paves a revolutionary path to the massive production and fully automated system for precise intermolecular analysis, such as the interaction between transcription factors and DNA. (2) Political science research. We analyzed how the transnational advocacy network simultaneously provides social power and exacerbates global inequalities. (3) Smart grid research. We applied network methods to detect and localize anomalies in smart grids. (4) Public health and Bioinformatics research. I developed various methods to promote data analytics in gastric cancer, obstructive sleep apnea, and coronary heart disease. Recently, I have been particularly interested in developing methods for spatial transcriptomics, including spatial domain segmentation. (5) Smart cities research. We analyzed transportation networks to promote the smart city.

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.

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  1. Wang, Y. Y., Cheng, Y. H., Mukherjee, D., Cheng, H. M. Transfer Learning on Edge Connecting Probability Estimation Under Graphon Model. NeurIPS. 2025.
  2. Guo, Y. C., Liu, S. J.*, Cheng, H. M.*, Ma, Y.* (*Co-corresponding Authors). JADE: Joint Alignment and Deep Embedding for Multi-Slice Spatial Transcriptomics. NeurIPS. 2025.
  3. Wu S, Feng Y, Cheng H, Huang H, Li Y, Ling F, Ma P, Zhong W, Shen Y. Personalized risk score prediction and testing policy adaptations of a COVID-19 population-based contact tracing network. Epidemiol Infect. 2025 Jul 24; 153:e90. PMID: 40702773; PMCID: PMC12394023; DOI: 10.1017/S0950268825100319;
     
  4. Lu, H. R., Cheng, H. M., Wang, Y., Xie, Y. G., Yan, H., Wang, X. D., Ma, P., and Zhong, W. X. . Mortgage prepayment modeling via a smoothing spline state space model. Journal of Data Science. 2025.
  5. Huimin Cheng, Ye Wang, Ping Ma, Amanda Murdie. Pathways to Brokerage: A Relational Approach to Understanding Global South Inter-Community NGO Networking. Oxford University Press. 2025.
  6. Spartano NL, Sultana N, Lin H, Cheng H, Lu S, Fei D, Murabito JM, Walker ME, Wolpert HA, Steenkamp DW. Defining Continuous Glucose Monitor Time in Range in a Large, Community-Based Cohort Without Diabetes. J Clin Endocrinol Metab. 2025 Mar 17; 110(4):1128-1134.View Related Profiles. PMID: 39257191; PMCID: PMC11913108; DOI: 10.1210/clinem/dgae626;
     
  7. Cai J, Wu S, Cheng H, Zhong W, Yuan GC, Ma P. Protocol to boost the robustness and accuracy of spatial transcriptomics algorithms using ensemble techniques. STAR Protoc. 2025 Mar 21; 6(1):103608. PMID: 39879360; PMCID: PMC11803146; DOI: 10.1016/j.xpro.2025.103608;
     
  8. Jin, M. H., Dhamija, S., Park, S., Cheng, H. M.*, and Son, M. J.* (Co-corresponding Author). Transfer-learning enhanced adaptive sampling for accelerating ultrafast spectroscopy. The Journal of Chemical Physics. 2025.
  9. Cai J, Cheng H, Wu S, Zhong W, Yuan GC, Ma P. WEST is an ensemble method for spatial transcriptomics analysis. Cell Rep Methods. 2024 Nov 18; 4(11):100886. PMID: 39515332; PMCID: PMC11705770; DOI: 10.1016/j.crmeth.2024.100886;
     
  10. Deng, J. Y., Yang, X. D., Yu, J., Liu, S. J., Shen, Z. M., Huang, D. Y., Cheng, H. M. Network Tight Community Detection. International Conference on Machine Learning (ICML). 2024.
Showing 10 of 29 results. Show More

This graph shows the total number of publications by year, by first, middle/unknown, or last author.

Bar chart showing 27 publications over 10 distinct years, with a maximum of 8 publications in 2025

YearPublications
20161
20171
20181
20194
20202
20214
20221
20232
20243
20258


2022 Southeastern Conference: Emerging Scholars Award ($35,000)
2022 Georgia Statistics Day: 1st Place Student Poster Presentation Award
2022 University of Georgia: Summer Research Grant ($1,500)
2021 Department of Statistics, University of Georgia: Best Beginning student
2021 Oconee County School: Outstanding Mentor
2019 University of Georgia: Entrepreneurial Team Lead of UGA NSF I-Corps program
2019 University of Georgia: Bargmann Travel Fund for The 2019 Joint Statistical Meetings
2017 Central University of Finance and Economics: National Scholarship
2017 Central University of Finance and Economics: Excellent Graduate of Beijing
2017 Central University of Finance and Economics: Distinguished Graduation Thesis Award
Contact for Mentoring:

801 Massachusetts Ave
Boston MA 02118
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