Virgile Andreani, PhD
Postdoctoral Associate (previously held)
Boston University College of Engineering
Biomedical Engineering




Dr. Andreani develops quantitative models of antibiotic resistance in bacteria. He likes scientific computing and in particular stochastic algorithms, numerical simulations, continuous and discrete optimization.

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.

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  1. Andreani V, South EJ, Dunlop MJ. Generating information-dense promoter sequences with optimal string packing. PLoS Comput Biol. 2024 Jul; 20(7):e1012276.View Related Profiles. PMID: 39047028; PMCID: PMC11268586; DOI: 10.1371/journal.pcbi.1012276;
     
  2. Andreani V, South EJ, Dunlop MJ. Generating information-dense nucleotide sequences with optimal string packing. bioRxiv. 2023 Nov 03.View Related Profiles. PMID: 37961203; PMCID: PMC10635063; DOI: 10.1101/2023.11.01.565124;
     
  3. Tague N, Andreani V, Fan Y, Timp W, Dunlop MJ. Comprehensive Screening of a Light-Inducible Split Cre Recombinase with Domain Insertion Profiling. ACS Synth Biol. 2023 Oct 20; 12(10):2834-2842.View Related Profiles. PMID: 37788288
     
  4. Abril-Pla O, Andreani V, Carroll C, Dong L, Fonnesbeck CJ, Kochurov M, Kumar R, Lao J, Luhmann CC, Martin OA, Osthege M, Vieira R, Wiecki T, Zinkov R. PyMC: a modern, and comprehensive probabilistic programming framework in Python. PeerJ Comput Sci. 2023; 9:e1516. PMID: 37705656; PMCID: PMC10495961; DOI: 10.7717/peerj-cs.1516;
     
  5. Tague N, Andreani V, Fan Y, Timp W, Dunlop MJ. Comprehensive screening of a light-inducible split Cre recombinase with domain insertion profiling. bioRxiv. 2023 May 26.View Related Profiles. PMID: 37293111; PMCID: PMC10245967; DOI: 10.1101/2023.05.26.542511;
     
  6. Sampaio NMV, Blassick CM, Andreani V, Lugagne JB, Dunlop MJ. Dynamic gene expression and growth underlie cell-to-cell heterogeneity in Escherichia coli stress response. Proc Natl Acad Sci U S A. 2022 Apr 05; 119(14):e2115032119.View Related Profiles. PMID: 35344432; PMCID: PMC9168488; DOI: 10.1073/pnas.2115032119;
     
  7. Weill É, Andréani V, Aditya C, Martinon P, Ruess J, Batt G, Bonnans F. Optimal control of an artificial microbial differentiation system for protein bioproduction. ECC19. 2019. View Publication
  8. Meredith HR, Andreani V, Ma HR, Lopatkin AJ, Lee AJ, Anderson DJ, Batt G, You L. Applying ecological resistance and resilience to dissect bacterial antibiotic responses. Sci Adv. 2018 Dec; 4(12):eaau1873. PMID: 30525104; PMCID: PMC6281428; DOI: 10.1126/sciadv.aau1873;
     

This graph shows the total number of publications by year, by first, middle/unknown, or last author.

Bar chart showing 8 publications over 5 distinct years, with a maximum of 4 publications in 2023

YearPublications
20181
20191
20221
20234
20241

Contact for Mentoring:

44 Cummington Mall
Boston MA 02215
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