Amy E Baker, PhD
Research Assistant Professor
Boston University Chobanian & Avedisian School of Medicine
Pathology & Laboratory Medicine

PhD, Geisel School of Medicine
BS, Tufts University

Diversity, Equity, Inclusion and Accessibility

2018- Grant Writer, created proposals designed to support underrepresented students in STEM including NSF initiative IUSE, NSF program S-STEM, and NIH initiative U-RISE

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.

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  1. Borer B, Zhang IH, Baker AE, O'Toole GA, Babbin AR. Porous marine snow differentially benefits chemotactic, motile, and nonmotile bacteria. PNAS Nexus. 2023 Feb; 2(2):pgac311. PMID: 36845354; PMCID: PMC9944246; DOI: 10.1093/pnasnexus/pgac311;
  2. Lee CK, Vachier J, de Anda J, Zhao K, Baker AE, Bennett RR, Armbruster CR, Lewis KA, Tarnopol RL, Lomba CJ, Hogan DA, Parsek MR, O'Toole GA, Golestanian R, Wong GCL. Social Cooperativity of Bacteria during Reversible Surface Attachment in Young Biofilms: a Quantitative Comparison of Pseudomonas aeruginosa PA14 and PAO1. mBio. 2020 Feb 25; 11(1). PMID: 32098815; PMCID: PMC7042694; DOI: 10.1128/mBio.02644-19;
  3. Lewis KA, Baker AE, Chen AI, Harty CE, Kuchma SL, O'Toole GA, Hogan DA. Ethanol Decreases Pseudomonas aeruginosa Flagellar Motility through the Regulation of Flagellar Stators. J Bacteriol. 2019 Sep 15; 201(18). PMID: 31109994; PMCID: PMC6707923; DOI: 10.1128/JB.00285-19;
  4. Baker AE, Webster SS, Diepold A, Kuchma SL, Bordeleau E, Armitage JP, O'Toole GA. Flagellar Stators Stimulate c-di-GMP Production by Pseudomonas aeruginosa. J Bacteriol. 2019 Sep 15; 201(18). PMID: 30642992; PMCID: PMC6707927; DOI: 10.1128/JB.00741-18;
  5. Lee CK, de Anda J, Baker AE, Bennett RR, Luo Y, Lee EY, Keefe JA, Helali JS, Ma J, Zhao K, Golestanian R, O'Toole GA, Wong GCL. Multigenerational memory and adaptive adhesion in early bacterial biofilm communities. Proc Natl Acad Sci U S A. 2018 Apr 24; 115(17):4471-4476. PMID: 29559526; PMCID: PMC5924909; DOI: 10.1073/pnas.1720071115;
  6. de Anda J, Lee EY, Lee CK, Bennett RR, Ji X, Soltani S, Harrison MC, Baker AE, Luo Y, Chou T, O'Toole GA, Armani AM, Golestanian R, Wong GCL. High-Speed "4D" Computational Microscopy of Bacterial Surface Motility. ACS Nano. 2017 Sep 26; 11(9):9340-9351. PMID: 28836761; PMCID: PMC5978429; DOI: 10.1021/acsnano.7b04738;
  7. Baker AE, O'Toole GA. Bacteria, Rev Your Engines: Stator Dynamics Regulate Flagellar Motility. J Bacteriol. 2017 Jun 15; 199(12). PMID: 28320878; PMCID: PMC5446623; DOI: 10.1128/JB.00088-17;
  8. Beagan K, Armstrong RL, Witsell A, Roy U, Renedo N, Baker AE, Schärer OD, McVey M. Drosophila DNA polymerase theta utilizes both helicase-like and polymerase domains during microhomology-mediated end joining and interstrand crosslink repair. PLoS Genet. 2017 May; 13(5):e1006813. PMID: 28542210; PMCID: PMC5466332; DOI: 10.1371/journal.pgen.1006813;
  9. Ribbe J, Baker AE, Euler S, O'Toole GA, Maier B. Role of Cyclic Di-GMP and Exopolysaccharide in Type IV Pilus Dynamics. J Bacteriol. 2017 Apr 15; 199(8). PMID: 28167523; PMCID: PMC5370421; DOI: 10.1128/JB.00859-16;
  10. Baker AE, Diepold A, Kuchma SL, Scott JE, Ha DG, Orazi G, Armitage JP, O'Toole GA. PilZ Domain Protein FlgZ Mediates Cyclic Di-GMP-Dependent Swarming Motility Control in Pseudomonas aeruginosa. J Bacteriol. 2016 Jul 01; 198(13):1837-46. PMID: 27114465; PMCID: PMC4907108; DOI: 10.1128/JB.00196-16;
Showing 10 of 14 results. Show More

This graph shows the total number of publications by year, by first, middle/unknown, or last author.

Bar chart showing 14 publications over 9 distinct years, with a maximum of 4 publications in 2017


2012-2015 National Science Foundation Graduate Research Fellowship Program
2011 Tufts University: The Benjamin G. Brown Scholarship for excellence in scientific research
2011 Tufts University: Cum Laude
2010 Tufts University: The Paula Frazier Poskitt Scholarship for excellence in biology research
2009 Tufts Summer Scholars pursuit of an independent summer research project
2007-2009 National Science Foundation Computer Science, Math, and Engineering Scholar
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72 E. Concord Street
Boston MA 02118
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