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PhD, Harvard University
MS, Indian Statistical Institute
BSc, Presidency College

Research
Publications

BU Research
NIH RePORTER Research

Bayesian Approaches to Model Selection for Survival Data
09/15/2011 - 08/31/2015 (Subcontract PI)
University of North Carolina at Chapel Hill NIH NIGMS
2R01GM070335-13A1

Title

Yr	Title	Project-Sub Proj	Pubs
2009	Bayesian methods for elucidating transcription regulatory mechanisms in eukaryoti	5R03HG004946-02	6
2008	Bayesian methods for elucidating transcription regulatory mechanisms in eukaryoti	1R03HG004946-01	6

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.

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Moser CB, Gupta M, Archer BN, White LF. The impact of prior information on estimates of disease transmissibility using Bayesian tools. PLoS One. 2015; 10(3):e0118762.View Related Profiles.

White, Laura
Gupta, Mayetri

PMID: 25793993; PMCID: PMC4368801; DOI: 10.1371/journal.pone.0118762;

Bis JC, DeStefano A, Liu X, Brody JA, Choi SH, Verhaaren BF, Debette S, Ikram MA, Shahar E, Butler KR, Gottesman RF, Muzny D, Kovar CL, Psaty BM, Hofman A, Lumley T, Gupta M, Wolf PA, van Duijn C, Gibbs RA, Mosley TH, Longstreth WT, Boerwinkle E, Seshadri S, Fornage M. Associations of NINJ2 sequence variants with incident ischemic stroke in the Cohorts for Heart and Aging in Genomic Epidemiology (CHARGE) consortium. PLoS One. 2014; 9(6):e99798.View Related Profiles.

DeStefano, Anita
Gupta, Mayetri
Wolf, Philip
Choi, Seung Hoan
Seshadri, Sudha

PMID: 24959832; PMCID: PMC4069013; DOI: 10.1371/journal.pone.0099798;

Lin H, Wang M, Brody JA, Bis JC, Dupuis J, Lumley T, McKnight B, Rice KM, Sitlani CM, Reid JG, Bressler J, Liu X, Davis BC, Johnson AD, O'Donnell CJ, Kovar CL, Dinh H, Wu Y, Newsham I, Chen H, Broka A, DeStefano AL, Gupta M, Lunetta KL, Liu CT, White CC, Xing C, Zhou Y, Benjamin EJ, Schnabel RB, Heckbert SR, Psaty BM, Muzny DM, Cupples LA, Morrison AC, Boerwinkle E. Strategies to design and analyze targeted sequencing data: cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium Targeted Sequencing Study. Circ Cardiovasc Genet. 2014 Jun; 7(3):335-43.View Related Profiles.

DeStefano, Anita
Liu, Ching-Ti
O'Donnell, Christopher
Benjamin, Emelia
Lin, Honghuang
Dupuis, Josee
Lunetta, Kathryn
Cupples, L
Gupta, Mayetri

PMID: 24951659; PMCID: PMC4176824; DOI: 10.1161/CIRCGENETICS.113.000350;

Lin H, Sinner MF, Brody JA, Arking DE, Lunetta KL, Rienstra M, Lubitz SA, Magnani JW, Sotoodehnia N, McKnight B, McManus DD, Boerwinkle E, Psaty BM, Rotter JI, Bis JC, Gibbs RA, Muzny D, Kovar CL, Morrison AC, Gupta M, Folsom AR, Kääb S, Heckbert SR, Alonso A, Ellinor PT, Benjamin EJ. Targeted sequencing in candidate genes for atrial fibrillation: the Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Targeted Sequencing Study. Heart Rhythm. 2014 Mar; 11(3):452-7.View Related Profiles.

Benjamin, Emelia
Lin, Honghuang
Magnani, Jared
Lunetta, Kathryn
Gupta, Mayetri

PMID: 24239840; PMCID: PMC3943920; DOI: 10.1016/j.hrthm.2013.11.012;

Gelfond JA, Ibrahim JG, Gupta M, Chen MH, Cody JD. Differential expression analysis with global network adjustment. BMC Bioinformatics. 2013; 14:258. PMID: 23968143; PMCID: PMC3766173; DOI: 10.1186/1471-2105-14-258;

Hendricks AE, Dupuis J, Gupta M, Logue MW, Lunetta KL. A comparison of gene region simulation methods. PLoS One. 2012; 7(7):e40925.View Related Profiles.

Dupuis, Josee
Lunetta, Kathryn
Logue, Mark
Gupta, Mayetri

PMID: 22815869; PMCID: PMC3399793; DOI: 10.1371/journal.pone.0040925;

Moser C, Gupta M. A generalized hidden Markov model for determining sequence-based predictors of nucleosome positioning. Stat Appl Genet Mol Biol. 2012; 11(2). PMID: 22499697; DOI: 10.2202/1544-6115.1707;

Gupta M, Cheung CL, Hsu YH, Demissie S, Cupples LA, Kiel DP, Karasik D. Identification of homogeneous genetic architecture of multiple genetically correlated traits by block clustering of genome-wide associations. J Bone Miner Res. 2011 Jun; 26(6):1261-71.View Related Profiles.

Cupples, L
Gupta, Mayetri
Demissie, Serkalem

PMID: 21611967; PMCID: PMC3312758; DOI: 10.1002/jbmr.333;

Mitra R, Gupta M. A continuous-index Bayesian hidden Markov model for prediction of nucleosome positioning in genomic DNA. Biostatistics. 2011 Jul; 12(3):462-77. PMID: 21193724; PMCID: PMC3114652; DOI: 10.1093/biostatistics/kxq077;

Meltzer M, Long K, Nie Y, Gupta M, Yang J, Montano M. The RNA editor gene ADAR1 is induced in myoblasts by inflammatory ligands and buffers stress response. Clin Transl Sci. 2010 Jun; 3(3):73-80.View Related Profiles.

Gupta, Mayetri
Montano, Monty

PMID: 20590675; PMCID: PMC2897727; DOI: 10.1111/j.1752-8062.2010.00199.x;

Showing 10 of 20 results. Show More

Gelfond JA, Gupta M, Ibrahim JG. A Bayesian hidden Markov model for motif discovery through joint modeling of genomic sequence and ChIP-chip data. Biometrics. 2009 Dec; 65(4):1087-95. PMID: 19210737; PMCID: PMC2794970; DOI: 10.1111/j.1541-0420.2008.01180.x;

Cheng F, Hartmann S, Gupta M, Ibrahim JG, Vision TJ. A hierarchical model for incomplete alignments in phylogenetic inference. Bioinformatics. 2009 Mar 1; 25(5):592-8. PMID: 19147663; PMCID: PMC2647833; DOI: 10.1093/bioinformatics/btp015;

Gupta M. Model selection and sensitivity analysis for sequence pattern models. Inst Math Stat Collect. 2009 Jan 01; 1:390-407. PMID: 20563269; PMCID: PMC2887058

Gupta M, Ibrahim JG. An Information Matrix Prior for Bayesian Analysis in Generalized Linear Models with High Dimensional Data. Stat Sin. 2009; 19(4):1641-1663. PMID: 20664718; PMCID: PMC2909687

Jeong YC, Walker NJ, Burgin DE, Kissling G, Gupta M, Kupper L, Birnbaum LS, Swenberg JA. Accumulation of M1dG DNA adducts after chronic exposure to PCBs, but not from acute exposure to polychlorinated aromatic hydrocarbons. Free Radic Biol Med. 2008 Sep 1; 45(5):585-91. PMID: 18534201; PMCID: PMC2570591; DOI: 10.1016/j.freeradbiomed.2008.04.043;

Gupta M. Generalized hierarchical markov models for the discovery of length-constrained sequence features from genome tiling arrays. Biometrics. 2007 Sep; 63(3):797-805. PMID: 17825011

Gupta M, Qu P, Ibrahim JG. A temporal hidden Markov regression model for the analysis of gene regulatory networks. Biostatistics. 2007 Oct; 8(4):805-20. PMID: 17400597

Maki A, Kono H, Gupta M, Asakawa M, Suzuki T, Matsuda M, Fujii H, Rusyn I. Predictive power of biomarkers of oxidative stress and inflammation in patients with hepatitis C virus-associated hepatocellular carcinoma. Ann Surg Oncol. 2007 Mar; 14(3):1182-90. PMID: 17195915

Giresi PG, Gupta M, Lieb JD. Regulation of nucleosome stability as a mediator of chromatin function. Curr Opin Genet Dev. 2006 Apr; 16(2):171-6. PMID: 16503136

Gupta M, Liu JS. De novo cis-regulatory module elicitation for eukaryotic genomes. Proc Natl Acad Sci U S A. 2005 May 17; 102(20):7079-84. PMID: 15883375; PMCID: PMC1129096

This graph shows the total number of publications by year, by first, middle/unknown, or last author.

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