Jennifer E. Beane-Ebel, PhD
Assistant Professor
Boston University School of Medicine
Dept of Medicine
Computational Biomedicine Section

PhD, Boston University




Single-cell RNA sequencing of the bronchial epithelium in smokers with lung cancer
07/01/2014 - 06/30/2017 (PI)
Department of Defense/Army Medical Research Acquisition Activity

Quasispecies dynamics in arbovirius emergence persistence and fitness
09/27/2012 - 08/31/2016 (PI)
Colorado State University NIH NIAID
5R01AI067380-09

Biomarkers of pre-malignant disease progression for lung cancer detection
07/15/2012 - 07/14/2016 (PI)
American Thoracic Society/ LUNGevity Foundation

Biomarkers of Pre-malignant Disease Progression for Lung Cancer Detection
07/15/2012 - 07/14/2013 (PI)
American Thoracic Society/ LUNGevity Foundation




Yr Title Project-Sub Proj Pubs
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.

  1. Grubaugh ND, Smith DR, Brackney DE, Bosco-Lauth AM, Fauver JR, Campbell CL, Felix TA, Romo H, Duggal NK, Dietrich EA, Eike T, Beane JE, Bowen RA, Black WC, Brault AC, Ebel GD. Experimental evolution of an RNA virus in wild birds: evidence for host-dependent impacts on population structure and competitive fitness. PLoS Pathog. 2015 May; 11(5):e1004874. PMID: 25993022; PMCID: PMC4439088; DOI: 10.1371/journal.ppat.1004874;.
  2. Campbell JD, Liu G, Luo L, Xiao J, Gerrein J, Juan-Guardela B, Tedrow J, Alekseyev YO, Yang IV, Correll M, Geraci M, Quackenbush J, Sciurba F, Schwartz DA, Kaminski N, Johnson WE, Monti S, Spira A, Beane J, Lenburg ME. Assessment of microRNA differential expression and detection in multiplexed small RNA sequencing data. RNA. 2015 Feb; 21(2):164-71.View Related Profiles. PMID: 25519487; PMCID: PMC4338344; DOI: 10.1261/rna.046060.114;.
  3. Beane J, Cheng L, Soldi R, Zhang X, Liu G, Anderlind C, Lenburg ME, Spira A, Bild AH. SIRT1 pathway dysregulation in the smoke-exposed airway epithelium and lung tumor tissue. Cancer Res. 2012 Nov 15; 72(22):5702-11.View Related Profiles. PMID: 22986747; DOI: 10.1158/0008-5472.CAN-12-1043;.
  4. Beane J, Vick J, Schembri F, Anderlind C, Gower A, Campbell J, Luo L, Zhang XH, Xiao J, Alekseyev YO, Wang S, Levy S, Massion PP, Lenburg M, Spira A. Characterizing the impact of smoking and lung cancer on the airway transcriptome using RNA-Seq. Cancer Prev Res (Phila). 2011 Jun; 4(6):803-17.View Related Profiles. PMID: 21636547; PMCID: PMC3694393; DOI: 10.1158/1940-6207.CAPR-11-0212;.
  5. Brackney DE, Beane JE, Ebel GD. RNAi targeting of West Nile virus in mosquito midguts promotes virus diversification. PLoS Pathog. 2009 Jul; 5(7):e1000502. PMID: 19578437; PMCID: PMC2698148; DOI: 10.1371/journal.ppat.1000502;.
  6. Beane J, Spira A, Lenburg ME. Clinical impact of high-throughput gene expression studies in lung cancer. J Thorac Oncol. 2009 Jan; 4(1):109-18.View Related Profiles. PMID: 19096318; PMCID: PMC2731413; DOI: 10.1097/JTO.0b013e31819151f8;.
  7. Beane J, Sebastiani P, Whitfield TH, Steiling K, Dumas YM, Lenburg ME, Spira A. A prediction model for lung cancer diagnosis that integrates genomic and clinical features. Cancer Prev Res (Phila). 2008 Jun; 1(1):56-64.View Related Profiles. PMID: 19138936; DOI: 10.1158/1940-6207.CAPR-08-0011;.
  8. Millien G, Beane J, Lenburg M, Tsao PN, Lu J, Spira A, Ramirez MI. Characterization of the mid-foregut transcriptome identifies genes regulated during lung bud induction. Gene Expr Patterns. 2008 Jan; 8(2):124-39.View Related Profiles. PMID: 18023262; PMCID: PMC2440337.
  9. Spira A, Beane JE, Shah V, Steiling K, Liu G, Schembri F, Gilman S, Dumas YM, Calner P, Sebastiani P, Sridhar S, Beamis J, Lamb C, Anderson T, Gerry N, Keane J, Lenburg ME, Brody JS. Airway epithelial gene expression in the diagnostic evaluation of smokers with suspect lung cancer. Nat Med. 2007 Mar; 13(3):361-6.View Related Profiles. PMID: 17334370.
  10. Beane J, Sebastiani P, Liu G, Brody JS, Lenburg ME, Spira A. Reversible and permanent effects of tobacco smoke exposure on airway epithelial gene expression. Genome Biol. 2007; 8(9):R201.View Related Profiles. PMID: 17894889; PMCID: PMC2375039.
Showing 10 of 19 results. Show More

This graph shows the total number of publications by year, by first, middle/unknown, or last author.

Bar chart showing 19 publications over 11 distinct years, with a maximum of 5 publications in 2004

YearPublications
20011
20045
20052
20061
20073
20081
20092
20111
20121
20141
20151
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Boston MA 02118
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